- Molecular Tool 'FGF8/17/18>Eph3ΔC (Stolfi 2011)' >
- Transcript 'KH2012:KH.C12.191.v4...' >
- Transcript 'KH2012:KH.C2.150.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1088.g13620.01.t
Possible name(s)
ZBTB17; ZNF236; ZNF398
Gene model
Location
S1088 [37,718 / 41,361]
>Phmamm.CG.MTP2014.S1088.g13620.01.p
DKNNSPPKTSTNKNPDSLQVQSVYSMSPKLPNNQSPTVASSKKTKSLQSAKVVLGSKTNS
LSNNYNGDVDIAATATTIVTSDCETLNPSVYTCKDCCKYFTNVTEAVNHYYSEHPVSSTP
VKPVSSRPTHAPDRNSHSCPHCGRLFNNKNNLKRHILIKHTTDKRFKCSICGRRYAIRQS
LQYHMRSIHGKETEVEKPSVTSPTISSSNPTLQYEGIGHLITSSTDQSELNMHPAKKSPA
HEKRLSKLSTADDFSAITSTTSYMADASMLENVDKSELQPSVSGEDLPSIQRIESIQNNS
SQNITSKLGVENETNVIGSESRLVKVSFAQTCSNFWF
>Phmamm.CG.MTP2014.S1088.g13620.01.t
GTGACAAGAACAATTCACCGCCCAAAACTTCGACCAACAAGAATCCCGACTCACTTCAGG
TTCAATCTGTCTATTCCATGTCCCCTAAATTACCAAATAACCAATCACCCACTGTGGCGT
CTAGCAAAAAGACTAAATCGCTCCAATCAGCGAAAGTTGTTTTAGGGAGTAAAACAAATA
GTTTGTCCAACAATTACAATGGGGATGTTGATATAGCTGCAACTGCAACAACTATTGTAA
CATCTGATTGTGAAACACTAAATCCATCAGTCTACACATGCAAAGATTGCTGTAAATACT
TTACGAATGTAACAGAGGCAGTTAATCACTACTATTCAGAACACCCAGTTAGCTCTACAC
CAGTGAAACCAGTTAGTAGCAGACCAACTCATGCTCCTGACAGAAACAGCCACAGTTGTC
CTCATTGTGGCAGATTGTTCAACAACAAGAACAATCTCAAGCGGCACATACTTATCAAGC
ACACAACTGATAAGCGGTTTAAATGTAGTATTTGTGGGCGAAGGTACGCAATTCGGCAGT
CCTTACAGTACCATATGAGATCCATACATGGCAAAGAAACAGAAGTTGAAAAACCATCAG
TTACATCCCCCACAATTTCTTCATCAAACCCCACATTGCAGTATGAGGGCATTGGTCATT
TGATTACTTCCTCAACAGATCAATCTGAATTAAACATGCACCCTGCGAAGAAATCACCAG
CTCATGAAAAACGTTTAAGCAAACTTAGTACTGCAGATGACTTCAGTGCAATAACTTCCA
CCACATCATACATGGCAGATGCTTCAATGCTAGAAAATGTTGACAAAAGTGAATTGCAAC
CCTCTGTGAGCGGCGAAGATCTACCATCAATCCAAAGAATTGAAAGTATTCAAAACAACA
GCTCCCAAAACATAACCAGCAAGTTGGGTGTGGAAAATGAAACTAATGTTATTGGATCCG
AATCAAGATTGGTAAAGGTTAGTTTTGCACAAACTTGTTCAAACTTTTGGTTTTAACACA
GTACTTTTTTGTCAGTTGCTCGTCTTATCTTTTTTCAGGCTGAGCCCCATGCCACAATCC
CTTCCAGCTTACACGCAAAAGATTCAACTGCCTTTCCGGGTAAAGTAATATAAAGCACAC
ATGATTTGTGGTTCTAACCAGATTGATGTTGTAGGGTGTGTGAATGCAGTTACAAGTCTT
TCCAGTCCAGATCAAAATTGTGGTGGTGTGATGTTGCCACAAACAGTAGCAAGCATAGAA
CAAGTTGATTTGTCTGTTGAGTCTTTATCTGTACCTGCAGGTGGAAACCCGTTCGTATTG
TCTGGAACATCTCAATTGCCTGCTCTTTTGCCTGTATTTAGTGGAGAGTTTCGAAGAACC
TCAAACAATGATTTACCAATGTCTCAAAGTAGAGTTGGCTCACGTTTGCACCGTTGTGAC
ACATGCGACCGTGCATTTTCCACTATCCAGGCATATACAAGACATCGAAGATCTTGCAAT
AAGCATGAGTGTCCTATTTGTCATCGCGGTTTTTCTCAGATGGGAAACATGAGAAGGCAT
ATTAAGATATTTCATTCTGATCAGAAACCCTATGAATGCAAAGTCTGCAATAAAGCTTAT
GGCATTCAACAAAGTTTTCGCTACCACATGAGAGATAAACATGGAATAACAACTGTTGCC
AAACCAGTGTCAAAATCTAAAAAAGCAAATGCCGACA
SMART |
Znf_C2H2_type (IPR013087) - T[91-114] 2.5 - T[137-160] 5.7E-4 - T[166-189] 4.4E-4 |
ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[93-114] . - T[139-160] . - T[168-189] . |
Pfam |
Znf_C2H2_type (IPR013087) - T[137-160] 2.4E-4 - T[166-189] 0.0022 |
ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[137-165] 12.321 - T[166-194] 12.3 |
SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[137-186] 7.24E-12 |
Protein Name | Identity | Bit Score | e-value |
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