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TRANSCRIPT CARD

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  1. Clone 'ciad062c12' > 
  2. Clone 'ma103o24' > 
  3. Clone 'cien47433' > 
  4. Clone 'cilv018g08' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1088.g13622.01.t

Possible name(s)

CHP1; CHP2; MCFD2

Gene model

Phmamm.CG.MTP2014.S1088.g13622

Location

S1088 [48,109 / 54,458]

Sequences

Amino acid sequence

Length: 127

>Phmamm.CG.MTP2014.S1088.g13622.01.p
LAFANDDFKSQMDPSTEHNKAHLKEDLSGIIDKNPEDMNPVELQFHYFRQHDYDNDEKLD
GNEIIMSILHHEQQSMETNGGSQAERGFTDEQLISIVEEVLKYQDTDGDGKLDFHEYTTP
YNQAKQD

Nucleotide sequence

Length: 382

>Phmamm.CG.MTP2014.S1088.g13622.01.t
CTGGCATTTGCCAATGATGATTTTAAAAGCCAAATGGATCCAAGCACTGAACACAATAAA
GCTCATTTAAAAGAGGATCTCAGTGGAATCATTGACAAAAATCCAGAAGATATGAATCCT
GTAGAACTTCAATTTCATTACTTTCGTCAACATGACTATGATAATGATGAAAAACTTGAC
GGAAATGAAATCATCATGTCAATTTTGCACCATGAACAACAAAGCATGGAAACCAACGGA
GGGAGCCAGGCGGAACGAGGTTTTACCGATGAACAACTTATCTCTATTGTTGAAGAAGTT
TTAAAATACCAAGACACAGATGGCGACGGCAAACTGGACTTCCACGAATACACAACTCCC
TACAACCAAGCAAAACAGGACC

InterProScan

ProSiteProfiles
EF_hand_dom (IPR002048) - T[39-74] 5.308 - T[92-127] 9.911
SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[42-118] 6.98E-11
Pfam
EF_hand_dom (IPR002048) - T[45-118] 9.0E-10
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[105-117] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MCFD2_HUMAN 36.449 % 75.9 1.44E-18