- Transcript 'Cisavi.CG.ENS81.R9.1...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1095.g13655.01.t
Possible name(s)
AC012314.17; RPS9
Gene model
Location
S1095 [23,359 / 26,211]
Amino acid sequence
Length: 194
>Phmamm.CG.MTP2014.S1095.g13655.01.p
MPHARSLVHSKTYVTPRRPFEKARLDQELKLIGEYGLRNKREVWRVKYTLAKIRKAARDL
LTLDEKDTRRLFEGNALLRRLVRIGVLDEGKMKLDYVLGLKVEDFLERRLQTQVFKLGLA
KSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRRNQKK
TSGGGGGDEDEDED
Nucleotide sequence
Length: 585
>Phmamm.CG.MTP2014.S1095.g13655.01.t
ATGCCGCACGCGAGGAGTTTGGTGCATAGTAAGACGTATGTTACACCTCGACGTCCTTTC
GAGAAGGCTCGTTTAGATCAGGAGTTGAAACTGATCGGAGAATACGGTCTTCGTAATAAA
CGAGAGGTATGGAGGGTTAAATATACTCTGGCCAAAATCCGTAAAGCTGCTCGTGACTTA
CTTACACTTGATGAAAAAGATACAAGGCGACTTTTTGAAGGTAATGCTTTGTTGAGGCGA
CTGGTGCGTATTGGAGTACTGGATGAGGGCAAAATGAAACTTGATTATGTCCTGGGTTTG
AAAGTAGAAGATTTCTTGGAACGCCGACTTCAGACACAAGTGTTTAAACTGGGTTTGGCC
AAATCCATTCATCATGCCAGGATTCTAATTCGCCAAAGGCACATCAGGGTCCGCAAGCAA
GTGGTCAACATTCCCTCCTTTATTGTGAGACTTGACTCCCAAAAACACATTGACTTCTCT
CTTCGATCTCCATATGGTGGTGGAAGACCAGGACGTGTAAAGCGCCGTAACCAAAAGAAG
ACATCAGGTGGTGGTGGTGGTGATGAGGATGAAGATGAGGATTAA
| TIGRFAM |
Ribosomal_S4/S9_euk/arc (IPR005710) - T[1-165] 5.4E-71 |
| SMART |
Ribosomal_S4/S9_N (IPR001912) - T[5-107] 1.7E-19 |
| PANTHER |
Ribosomal_S4/S9 (IPR022801) - T[8-191] 6.4E-94 |
| Pfam |
Ribosomal_S4/S9_N (IPR001912) - T[18-63] 7.6E-6 |
| ProSitePatterns |
Ribosomal_S4_CS (IPR018079) - T[106-130] . |
| ProSiteProfiles |
S4_RNA-bd (IPR002942) - T[108-179] 10.213 |
| SMART |
S4_RNA-bd (IPR002942) - T[108-179] 0.0052 |
| CDD |
S4_RNA-bd (IPR002942) - T[108-150] 4.33267E-7 |
| Pfam |
S4_RNA-bd (IPR002942) - T[108-151] 2.7E-10 |
| Gene3D |
S4_RNA-bd_sf (IPR036986) - T[109-167] 1.5E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS9_HUMAN | 89.691 % | 336 | 1.4E-119 |