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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1095.g13655.02.t

Possible name(s)

AC012314.17; RPS9

Location

S1095 [23,368 / 25,629]

Sequences

Amino acid sequence

Length: 150

>Phmamm.CG.MTP2014.S1095.g13655.02.p
VWRVKYTLAKIRKAARDLLTLDEKDTRRLFEGNALLRRLVRIGVLDEGKMKLDYVLGLKV
EDFLERRLQTQVFKLGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLR
SPYGGGRPGRVKRRNQKKTSGGGGGDEDED

Nucleotide sequence

Length: 452

>Phmamm.CG.MTP2014.S1095.g13655.02.t
AGGTATGGAGGGTTAAATATACTCTGGCCAAAATCCGTAAAGCTGCTCGTGACTTACTTA
CACTTGATGAAAAAGATACAAGGCGACTTTTTGAAGGTAATGCTTTGTTGAGGCGACTGG
TGCGTATTGGAGTACTGGATGAGGGCAAAATGAAACTTGATTATGTCCTGGGTTTGAAAG
TAGAAGATTTCTTGGAACGCCGACTTCAGACACAAGTGTTTAAACTGGGTTTGGCCAAAT
CCATTCATCATGCCAGGATTCTAATTCGCCAAAGGCACATCAGGGTCCGCAAGCAAGTGG
TCAACATTCCCTCCTTTATTGTGAGACTTGACTCCCAAAAACACATTGACTTCTCTCTTC
GATCTCCATATGGTGGTGGAAGACCAGGACGTGTAAAGCGCCGTAACCAAAAGAAGACAT
CAGGTGGTGGTGGTGGTGATGAGGATGAAGAT

InterProScan

PANTHER
Ribosomal_S4/S9 (IPR022801) - T[1-148] 4.2E-76
TIGRFAM
Ribosomal_S4/S9_euk/arc (IPR005710) - T[1-123] 6.1E-52
ProSitePatterns
Ribosomal_S4_CS (IPR018079) - T[64-88] .
ProSiteProfiles
S4_RNA-bd (IPR002942) - T[66-137] 10.213
Pfam
S4_RNA-bd (IPR002942) - T[66-109] 1.7E-10
CDD
S4_RNA-bd (IPR002942) - T[66-108] 5.85719E-7
SMART
S4_RNA-bd (IPR002942) - T[66-137] 0.0052
Gene3D
S4_RNA-bd_sf (IPR036986) - T[67-137] 9.2E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS9_HUMAN 90 % 260 3.61E-90





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