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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C12.69.v2....'
  2. Clone 'AHC0AAA62YC19'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S10.g00420.02.t

Possible name(s)

EXD1; EXD3; EXOSC10

Location

S10 [152,013 / 156,400]

Sequences

Amino acid sequence

Length: 488

>Phmamm.CG.MTP2014.S10.g00420.02.p
IYIVNLFDTGIASHSLQLPRHSLDFLLHYYCDLNVDKKFQLADWRIRPIPEEMIAYAKGD
THYLLYVYDLMRNELVERDNGNSNLLRHVLNSSRDLCLMRYEKPLTTPTSHLLLLERRNR
RGKGKALNTQQMEALRLIYNWRDSMARQEDESTGYVLPNHMLLQIAEILPREAQGVLACC
NPIPPLLRQHVSVVHRLVMDARAKPNAKPGTSAKESNQATPETRVPVPAKSEDTYEDFLR
CPHDWSRGRPAQISFPRVQKGKIKFLSTSSLFGPAGNESTPKSVRYASTPTKPDSKVVLQ
KLNAIRQATWNPFQLFMPGGSTKSIKRTISESVASDSNNVSPPTLRQMLSGDFVWKMKRM
EEDEKEEVKIDNDPPKTFGTVINVPEEARRGTEEQAQVLRNMMKPRKHAGNRTHGGHEKH
QHSFSAPAVTFEPTQPNIHGQFHNQAAKRGFKRNRPGGNSNFVPHKFSDDDYSRFQRRGS
MKKKQFRH

Nucleotide sequence

Length: 4,194

>Phmamm.CG.MTP2014.S10.g00420.02.t
ATTTACATTGTTAATCTTTTCGATACTGGAATTGCTTCCCATTCCCTGCAGTTGCCACGA
CATTCGCTGGATTTCCTTCTTCATTACTACTGTGATTTAAATGTTGACAAAAAGTTTCAA
CTGGCTGATTGGCGGATCAGACCTATACCAGAGGAAATGATCGCATATGCAAAGGGCGAC
ACACACTATCTGCTTTACGTTTACGATCTAATGAGAAATGAGTTGGTGGAGCGGGACAAT
GGCAATTCTAACCTCTTGCGTCATGTGCTGAACAGCAGCCGTGATTTGTGTCTGATGCGT
TATGAGAAACCCTTGACCACACCCACGTCTCACCTTCTTTTGCTGGAAAGACGAAACCGA
CGCGGTAAGGGCAAAGCCTTGAACACCCAGCAAATGGAAGCTCTACGTCTCATCTACAAC
TGGCGTGACTCCATGGCGAGGCAGGAAGATGAAAGCACTGGGTACGTTCTGCCGAACCAC
ATGCTACTGCAGATAGCTGAAATTTTGCCACGCGAAGCGCAGGGTGTCCTTGCTTGCTGC
AATCCAATCCCACCCTTACTCAGACAACATGTTTCAGTGGTACACCGTTTGGTTATGGAT
GCCAGAGCTAAACCAAATGCTAAACCAGGAACTTCGGCGAAAGAGTCAAATCAAGCCACC
CCAGAGACAAGGGTACCAGTTCCTGCTAAATCAGAAGACACTTATGAAGATTTTCTGCGT
TGCCCGCATGACTGGTCACGTGGCAGACCAGCCCAAATTTCTTTTCCTCGGGTACAGAAG
GGGAAAATCAAATTTCTGTCAACTTCTAGTCTTTTTGGTCCTGCTGGAAACGAATCAACG
CCTAAAAGTGTAAGGTATGCCTCAACCCCGACCAAGCCAGACAGCAAGGTTGTTCTGCAA
AAGTTGAATGCCATTCGCCAGGCAACATGGAACCCCTTTCAACTGTTCATGCCTGGTGGT
TCCACTAAATCAATTAAAAGAACTATCTCCGAGAGTGTGGCCAGTGACAGTAATAATGTA
AGTCCGCCTACATTGCGACAAATGCTTTCAGGAGATTTTGTCTGGAAAATGAAACGAATG
GAGGAAGATGAAAAAGAGGAAGTGAAAATTGATAATGACCCACCAAAGACATTTGGCACA
GTTATCAATGTTCCTGAAGAGGCACGTCGAGGCACAGAAGAGCAAGCACAAGTGCTTCGG
AACATGATGAAACCCAGAAAGCATGCAGGGAATAGGACTCACGGTGGTCATGAAAAACAC
CAGCACTCATTCAGTGCGCCAGCTGTTACATTCGAACCAACACAGCCAAACATACATGGC
CAGTTTCACAACCAAGCAGCAAAACGAGGTTTCAAAAGAAACAGGCCTGGTGGAAATAGT
AACTTTGTTCCTCATAAGTTTTCTGATGATGACTATTCCCGGTTTCAAAGGAGGGGTTCA
ATGAAAAAGAAACAATTTCGACATTGAAAATTGGCAACTGATTCCATGCCATGAAAGACT
AATTTCAGCCTTCAGTGTACTGGATGTTTGTTTTAAAGAGTTTTATTTGGGAAAATGCTT
TTAGGTGGTGGTACCCACTTGCCTGAGTTGTAAAAAAATTGCTAAAAGCTAATAAATGTA
ATAATATCATGGAAATAAGAAAGCAAATTGCAATACACATCAACTTGAAACTGGAATATC
GTTAACTGAAAAAAGTAAGGCAATGCTAACCTGCACTAAACTGGACAAAACAATGCATAG
CTAATTCAATGTTAAATATATATATATATTAATAAACTCATTCACAATAACATACATTAT
TAGAATACATGTTCAATAGCACCAAAATCTTGCAATTTATATGCATAAACAGTAACATTG
AAGAACAGCTTTAACCAACACATAGAAATGAAAACCATTTCTGCATAAAAAGCAAGAGGT
TCCGTTATAGATTGCATATATTGTCATGTGTAGCAGTCTGTAAGGCATGTGAACAAAAAT
TATGTTTAAATCACAAAAACAAGGTAAAGTTATTGTATATTACAAAGGTAGGAACATAAA
AAATATATCGCAGTCAATTATAAAACAATAATAAACACTTACAAACAGTTCTATCATATT
TCACATGTGATAGTTACGGTGGGGTTTCAGCCGGTTCCCTAGAACCGTCTCACGAAATTT
TATGAGATCAGTCAACCGGTTAGCATTACTGGTTACTGTCAAAAGGCTTTTTGTAACTGA
ACCGGCTGAAAAATATGACTTTTGTGTTAGAACCAGCTGACAAACAATTTGAATCCCACC
ACTGCATAATTACTATATTTGTATTTTGCATTGCATTATAATAGGTAGCTAATTTAGTTG
AAATCATTTTTGGAATAGGTGGCATCTTGATAAGAAAAGATTAAACAGGTAAAATGGCAA
TGTTTTACCAGTAAGATCCTATAATTCTGTAACATTTTTCCAGTTATGTTTTTTGACAGA
CCCCCTTAATTCTCATTGTAACATAACTGTCACAAAATATATTATAATTTTAGTTAAGAA
TGATAATAGTTGTTAAAATTAGAAACATGTTTTTTATACATAGCCATTTTATCTGTACTA
TATCCTATTAAAGGGTTAATTATATACACCATTTGACAACAAGGTAATGTTAACTAGAAG
GGTGGCTTAGCACATATTGCCCTTGCACATACACTATAGCATATTTTGAAACATTAATAT
ATTTCCTACACTTATTTATATTGGGTCCCATATTAGCCATCGTCTTTTATAACCTTGGTT
GTTTCTGCAAGCAAAAACTCATGGGTCCCCACACATGCAAAGTTGTAGATAATGCATTTC
AATAGATAACAATGAGTAAGTAGGATAACTAATTGAGGTTCAACACACACAAACTTAAAA
GTAGGAAACCACAATGACTCAATCAATAGTACTGCAAAATTTCAGTCCAATCTGCCAATG
TTTAAAATTTCAACCACTAGAGGTGTTTTGAGCAACAACCGTTAATGTTTCTGACGTCAA
AGGGCTGTTAACAACCCCCGAACTGCAATGGCGCAATAACGATAATTGGCATACTTTACA
AGCTATCCAAATTTTAGCCAATTCTGACATTGTTTACAAACTCACCCGTTTTAGGGGGCT
AGCGGGGTAAATACTAGGGTTATCCGGACAAACAAAGTGGGATGCACATCTACATAACTA
TATCTACCATCTGTATAAGTTTCAGCCACATCCATCAAGCATTTGATGGCAAAACGAGTC
AGACAAACTTCGGGGAAAAAAACATTTTAGGGGGCTAGCGGGGTAAATACTGGGGTTATC
AACAAAAACAAAGTGGGATGCACATCTACATAACTACATCTACCATCTGTGTAAATTTCA
GCCGAATCCGTCAAACATTTGATAGAAAAACGACACAGTCAAACTTCGGGGGGAAATACC
CATTTTAGGGGGCTAGCGGGTGAATACTGGGGTTATCAACAAAAACAAAGTGGGATGCAC
ATCTACATAACTACATCTACCATCTGTGTAAATTTCATCCAAATCCATCAAGGATTTGAT
GGAAAAACGAGTCGGACAAACTTTGGGGAGAAGAAAAATGAAAGAAAAAAAACACATTTT
GAGTAAAATCAATATGTGTCCCCTTCAGGGAAGGGGACCCATAAATTGTTAATGTTACAC
TTAAAACGAAATGTTAAAATGAATATAACCAGAAATAAAAGGTGTAATTTACAACTTGTA
AATGATTCAACACTATTGTCAATTTTTGAGAACTATTGACTTGGACACTGCAATGCTCAT
ACACAGGATATTGTCATGGCATTACAATATGCAATATAACTGATATCTAACTACTTGTAG
GTAAAGGCAGGCTGGCTCCAATCATAATAATTGTACTGTGGTGCATATGTCTGTTCCTGA
GGGTTGTCGTCACTTTTAGGGATGGTAACAGTTGCAGCTGAAGCATAAGAAGGTGGGGGA
ACTGCAAACAATGTTTTCACTATAACACTCTCGCCTTGTACTTATTTTTACTGCTAAAAA
CAATCAGTTTACTTGAGTATTGTGCTGGAGCCATGCCTGAAGGGGCACCATATGATGGTT
GGTCCAATGAGGTTTCTGTTCCCTGTGCACCATGATCAAGTGGAATTGTTCCAACTTCCA
ATGGTGCACGCACCTTCAGATTAAAGTGACACCTGGGTGTTTTACAGTCCAGCT

InterProScan

Pfam
3'-5'_exonuclease_dom (IPR002562) - T[1-75] 6.4E-18
SUPERFAMILY
RNaseH-like_sf (IPR012337) - T[1-104] 1.26E-29
SUPERFAMILY
HRDC-like_sf (IPR010997) - T[126-208] 1.44E-23
ProSiteProfiles
HRDC_dom (IPR002121) - T[128-208] 16.883
SMART
HRDC_dom (IPR002121) - T[128-208] 1.1E-13
Pfam
HRDC_dom (IPR002121) - T[132-195] 4.0E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EXOSX_HUMAN 39.948 % 262 1.43E-78