- Transcript 'KH2012:KH.C12.69.v2....' >
- Clone 'AHC0AAA62YC19' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S10.g00420.02.t
Possible name(s)
EXD1; EXD3; EXOSC10
Gene model
Location
S10 [152,013 / 156,400]
Amino acid sequence
Length: 488
>Phmamm.CG.MTP2014.S10.g00420.02.p
IYIVNLFDTGIASHSLQLPRHSLDFLLHYYCDLNVDKKFQLADWRIRPIPEEMIAYAKGD
THYLLYVYDLMRNELVERDNGNSNLLRHVLNSSRDLCLMRYEKPLTTPTSHLLLLERRNR
RGKGKALNTQQMEALRLIYNWRDSMARQEDESTGYVLPNHMLLQIAEILPREAQGVLACC
NPIPPLLRQHVSVVHRLVMDARAKPNAKPGTSAKESNQATPETRVPVPAKSEDTYEDFLR
CPHDWSRGRPAQISFPRVQKGKIKFLSTSSLFGPAGNESTPKSVRYASTPTKPDSKVVLQ
KLNAIRQATWNPFQLFMPGGSTKSIKRTISESVASDSNNVSPPTLRQMLSGDFVWKMKRM
EEDEKEEVKIDNDPPKTFGTVINVPEEARRGTEEQAQVLRNMMKPRKHAGNRTHGGHEKH
QHSFSAPAVTFEPTQPNIHGQFHNQAAKRGFKRNRPGGNSNFVPHKFSDDDYSRFQRRGS
MKKKQFRH
Nucleotide sequence
Length: 4,194
>Phmamm.CG.MTP2014.S10.g00420.02.t
ATTTACATTGTTAATCTTTTCGATACTGGAATTGCTTCCCATTCCCTGCAGTTGCCACGA
CATTCGCTGGATTTCCTTCTTCATTACTACTGTGATTTAAATGTTGACAAAAAGTTTCAA
CTGGCTGATTGGCGGATCAGACCTATACCAGAGGAAATGATCGCATATGCAAAGGGCGAC
ACACACTATCTGCTTTACGTTTACGATCTAATGAGAAATGAGTTGGTGGAGCGGGACAAT
GGCAATTCTAACCTCTTGCGTCATGTGCTGAACAGCAGCCGTGATTTGTGTCTGATGCGT
TATGAGAAACCCTTGACCACACCCACGTCTCACCTTCTTTTGCTGGAAAGACGAAACCGA
CGCGGTAAGGGCAAAGCCTTGAACACCCAGCAAATGGAAGCTCTACGTCTCATCTACAAC
TGGCGTGACTCCATGGCGAGGCAGGAAGATGAAAGCACTGGGTACGTTCTGCCGAACCAC
ATGCTACTGCAGATAGCTGAAATTTTGCCACGCGAAGCGCAGGGTGTCCTTGCTTGCTGC
AATCCAATCCCACCCTTACTCAGACAACATGTTTCAGTGGTACACCGTTTGGTTATGGAT
GCCAGAGCTAAACCAAATGCTAAACCAGGAACTTCGGCGAAAGAGTCAAATCAAGCCACC
CCAGAGACAAGGGTACCAGTTCCTGCTAAATCAGAAGACACTTATGAAGATTTTCTGCGT
TGCCCGCATGACTGGTCACGTGGCAGACCAGCCCAAATTTCTTTTCCTCGGGTACAGAAG
GGGAAAATCAAATTTCTGTCAACTTCTAGTCTTTTTGGTCCTGCTGGAAACGAATCAACG
CCTAAAAGTGTAAGGTATGCCTCAACCCCGACCAAGCCAGACAGCAAGGTTGTTCTGCAA
AAGTTGAATGCCATTCGCCAGGCAACATGGAACCCCTTTCAACTGTTCATGCCTGGTGGT
TCCACTAAATCAATTAAAAGAACTATCTCCGAGAGTGTGGCCAGTGACAGTAATAATGTA
AGTCCGCCTACATTGCGACAAATGCTTTCAGGAGATTTTGTCTGGAAAATGAAACGAATG
GAGGAAGATGAAAAAGAGGAAGTGAAAATTGATAATGACCCACCAAAGACATTTGGCACA
GTTATCAATGTTCCTGAAGAGGCACGTCGAGGCACAGAAGAGCAAGCACAAGTGCTTCGG
AACATGATGAAACCCAGAAAGCATGCAGGGAATAGGACTCACGGTGGTCATGAAAAACAC
CAGCACTCATTCAGTGCGCCAGCTGTTACATTCGAACCAACACAGCCAAACATACATGGC
CAGTTTCACAACCAAGCAGCAAAACGAGGTTTCAAAAGAAACAGGCCTGGTGGAAATAGT
AACTTTGTTCCTCATAAGTTTTCTGATGATGACTATTCCCGGTTTCAAAGGAGGGGTTCA
ATGAAAAAGAAACAATTTCGACATTGAAAATTGGCAACTGATTCCATGCCATGAAAGACT
AATTTCAGCCTTCAGTGTACTGGATGTTTGTTTTAAAGAGTTTTATTTGGGAAAATGCTT
TTAGGTGGTGGTACCCACTTGCCTGAGTTGTAAAAAAATTGCTAAAAGCTAATAAATGTA
ATAATATCATGGAAATAAGAAAGCAAATTGCAATACACATCAACTTGAAACTGGAATATC
GTTAACTGAAAAAAGTAAGGCAATGCTAACCTGCACTAAACTGGACAAAACAATGCATAG
CTAATTCAATGTTAAATATATATATATATTAATAAACTCATTCACAATAACATACATTAT
TAGAATACATGTTCAATAGCACCAAAATCTTGCAATTTATATGCATAAACAGTAACATTG
AAGAACAGCTTTAACCAACACATAGAAATGAAAACCATTTCTGCATAAAAAGCAAGAGGT
TCCGTTATAGATTGCATATATTGTCATGTGTAGCAGTCTGTAAGGCATGTGAACAAAAAT
TATGTTTAAATCACAAAAACAAGGTAAAGTTATTGTATATTACAAAGGTAGGAACATAAA
AAATATATCGCAGTCAATTATAAAACAATAATAAACACTTACAAACAGTTCTATCATATT
TCACATGTGATAGTTACGGTGGGGTTTCAGCCGGTTCCCTAGAACCGTCTCACGAAATTT
TATGAGATCAGTCAACCGGTTAGCATTACTGGTTACTGTCAAAAGGCTTTTTGTAACTGA
ACCGGCTGAAAAATATGACTTTTGTGTTAGAACCAGCTGACAAACAATTTGAATCCCACC
ACTGCATAATTACTATATTTGTATTTTGCATTGCATTATAATAGGTAGCTAATTTAGTTG
AAATCATTTTTGGAATAGGTGGCATCTTGATAAGAAAAGATTAAACAGGTAAAATGGCAA
TGTTTTACCAGTAAGATCCTATAATTCTGTAACATTTTTCCAGTTATGTTTTTTGACAGA
CCCCCTTAATTCTCATTGTAACATAACTGTCACAAAATATATTATAATTTTAGTTAAGAA
TGATAATAGTTGTTAAAATTAGAAACATGTTTTTTATACATAGCCATTTTATCTGTACTA
TATCCTATTAAAGGGTTAATTATATACACCATTTGACAACAAGGTAATGTTAACTAGAAG
GGTGGCTTAGCACATATTGCCCTTGCACATACACTATAGCATATTTTGAAACATTAATAT
ATTTCCTACACTTATTTATATTGGGTCCCATATTAGCCATCGTCTTTTATAACCTTGGTT
GTTTCTGCAAGCAAAAACTCATGGGTCCCCACACATGCAAAGTTGTAGATAATGCATTTC
AATAGATAACAATGAGTAAGTAGGATAACTAATTGAGGTTCAACACACACAAACTTAAAA
GTAGGAAACCACAATGACTCAATCAATAGTACTGCAAAATTTCAGTCCAATCTGCCAATG
TTTAAAATTTCAACCACTAGAGGTGTTTTGAGCAACAACCGTTAATGTTTCTGACGTCAA
AGGGCTGTTAACAACCCCCGAACTGCAATGGCGCAATAACGATAATTGGCATACTTTACA
AGCTATCCAAATTTTAGCCAATTCTGACATTGTTTACAAACTCACCCGTTTTAGGGGGCT
AGCGGGGTAAATACTAGGGTTATCCGGACAAACAAAGTGGGATGCACATCTACATAACTA
TATCTACCATCTGTATAAGTTTCAGCCACATCCATCAAGCATTTGATGGCAAAACGAGTC
AGACAAACTTCGGGGAAAAAAACATTTTAGGGGGCTAGCGGGGTAAATACTGGGGTTATC
AACAAAAACAAAGTGGGATGCACATCTACATAACTACATCTACCATCTGTGTAAATTTCA
GCCGAATCCGTCAAACATTTGATAGAAAAACGACACAGTCAAACTTCGGGGGGAAATACC
CATTTTAGGGGGCTAGCGGGTGAATACTGGGGTTATCAACAAAAACAAAGTGGGATGCAC
ATCTACATAACTACATCTACCATCTGTGTAAATTTCATCCAAATCCATCAAGGATTTGAT
GGAAAAACGAGTCGGACAAACTTTGGGGAGAAGAAAAATGAAAGAAAAAAAACACATTTT
GAGTAAAATCAATATGTGTCCCCTTCAGGGAAGGGGACCCATAAATTGTTAATGTTACAC
TTAAAACGAAATGTTAAAATGAATATAACCAGAAATAAAAGGTGTAATTTACAACTTGTA
AATGATTCAACACTATTGTCAATTTTTGAGAACTATTGACTTGGACACTGCAATGCTCAT
ACACAGGATATTGTCATGGCATTACAATATGCAATATAACTGATATCTAACTACTTGTAG
GTAAAGGCAGGCTGGCTCCAATCATAATAATTGTACTGTGGTGCATATGTCTGTTCCTGA
GGGTTGTCGTCACTTTTAGGGATGGTAACAGTTGCAGCTGAAGCATAAGAAGGTGGGGGA
ACTGCAAACAATGTTTTCACTATAACACTCTCGCCTTGTACTTATTTTTACTGCTAAAAA
CAATCAGTTTACTTGAGTATTGTGCTGGAGCCATGCCTGAAGGGGCACCATATGATGGTT
GGTCCAATGAGGTTTCTGTTCCCTGTGCACCATGATCAAGTGGAATTGTTCCAACTTCCA
ATGGTGCACGCACCTTCAGATTAAAGTGACACCTGGGTGTTTTACAGTCCAGCT
| Pfam |
3'-5'_exonuclease_dom (IPR002562) - T[1-75] 6.4E-18 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[1-104] 1.26E-29 |
| SUPERFAMILY |
HRDC-like_sf (IPR010997) - T[126-208] 1.44E-23 |
| ProSiteProfiles |
HRDC_dom (IPR002121) - T[128-208] 16.883 |
| SMART |
HRDC_dom (IPR002121) - T[128-208] 1.1E-13 |
| Pfam |
HRDC_dom (IPR002121) - T[132-195] 4.0E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EXOSX_HUMAN | 39.948 % | 262 | 1.43E-78 |