- Molecular Tool 'EphrinA-b-MO (Imai 2009)' >
- Transcript 'KH2012:KH.C1.1014.v1...' >
- Transcript 'KH2012:KH.C12.207.v4...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1104.g13698.02.t
Possible name(s)
AOX1; XDH
Gene model
Location
S1104 [39,203 / 52,672]
Amino acid sequence
Length: 1,353
>Phmamm.CG.MTP2014.S1104.g13698.02.p
MPAAVSICSGDKTLKENNVLEFYVNGKKVIEKQADPEITLLTYLRTKLFLTGSKLGCGEG
GCGACTVMISKWDHINSKIIHYSANACLAPVVSVHGCAVTTVEGIGSTKTKLHAVQERLA
KFHGSQCGFCTPGIVMSMYALLRNKTVPSAEDIEGCLQGNLCRCTGYRPILSAFNTFTDP
CAGCPRGQNCCKNAATDNGFTNGLNGEDVVNGKGVSTEICFTKYDPTQQIIFPPELLMKG
KSQHIEALKFTGERVTWFRPILLEHLVELKGKYPDAQLVNGNTEVGVETGVKGRLYPVMI
SPSAVDELRSIQMDKNGVNVGASCTLSELRESFDSLRKLRPTAETQCVASIIEMLHWFAG
DQIRNVAAIGGNIMTASPISDLNPILMANESIATFRLHSRAKDRQVFMDQSFFPKYRTTC
AEKGEVLLSVHLPFNGKDEYIKAYKQSKRREDDIAIVNAAMRVVFHPGTCKVLKFVAAFG
GMAATSVMPEKTMQNMIGRMWTDDLIDNFAEWISEDFPLSLDAPGGMVEYREALAASLFF
KFFLYVKNCLVERGVMDEKLAERDLSALHEAAHMDRQLKGKQTWQEVKVEQPPLDKVGRS
LQHVAGELHATGEAVYVDDIPQCSSELYLCLVTSTRPHAFIREVDVSLASTSPGFVTYVD
HRDVGGSNNIAIYHAMEEVFATEKVTCIGQVIGAVVADSQARAQRAAQLVKIDYEDISPV
VITIEEAVSEKSFRSPIHKVVKGNAEETMTSCDQVIEGEVRTAGQEHFYMETQVCLAVPK
DGEEMEVYSSNQDPEALQKTSSAVLGVGQNKVQVRVKRLGGGFGGKATRFLLLSSPVIVA
AAKCGKPVRCMLTRQEDMSITGTRHPFLGKYKIGCTKEGRLVSLVLDLFSNGGNTQDSSM
YVMAKAMINSDNCYCIPNMLIRGTVCKTNIVSNTAFRGFGAPQAMFIAESWITAVAERLG
LSTEKVRETNLYRAGDLTHFNQVLETSNARRCWEECMKISQFDKRRIEVDAYNSKNRWRK
RGLACVPTKFAIGIKEYRCQAGALINIYTDGSVYLTHGGTEMGQGLHTKMIQIASRCLGI
PVSRIHISETSTTHVPNGGTTAGSLGSDMNGMAVKAACDEIVSRLAPIRKKFPELSWDKL
ILQAYMERVSLSATGFYRIPDMYSNWDVHTGTVKGRHSNYYTYGAAVSEVEVDCLTGDHV
VLQTDIVMDVGKSLNPAIDIGQIEGGFVQGYGLFTMEEPLHTSNGRLITVGPGAYKIPGF
GDCPKEFNVHLLGNSENDKAIYSSKAVGEPPLFLAASAFFAIKDAVGSARNDSGLHGRFR
MDAPATAERIRMTCGDRFVRQHRNHATAEEDES
Nucleotide sequence
Length: 4,168
>Phmamm.CG.MTP2014.S1104.g13698.02.t
CACAGACAAAGTTGAAGCAGTGTCGTAACTTTAGCATTGGTTTTTTTATGGTAAGCATAG
TACTTTTCAGACCTGTCAATTTTTCAGGCGCACTTATAGTTTTACCAAAATGCCTGCCGC
CGTTAGCATCTGCTCGGGTGACAAGACGCTCAAAGAAAATAATGTGTTGGAATTTTATGT
CAATGGCAAAAAGGTTATTGAAAAACAAGCAGATCCGGAAATAACTCTTCTGACTTACTT
GAGAACAAAACTTTTTCTTACTGGATCCAAGTTGGGATGTGGGGAAGGAGGATGTGGAGC
TTGCACTGTTATGATCTCAAAGTGGGATCACATCAACAGCAAAATCATACATTACTCGGC
AAACGCGTGTTTAGCTCCAGTGGTTTCAGTACATGGATGTGCTGTTACTACAGTAGAGGG
AATCGGCAGCACCAAGACCAAGTTACATGCAGTTCAGGAGCGTCTGGCTAAATTTCACGG
ATCTCAATGTGGTTTTTGCACCCCTGGCATCGTGATGTCAATGTATGCATTGTTACGCAA
CAAAACAGTGCCCAGTGCTGAAGATATCGAGGGATGTTTGCAAGGAAACTTGTGTCGCTG
CACCGGATACCGACCAATACTGAGTGCGTTCAACACTTTTACGGACCCGTGCGCGGGATG
TCCACGGGGACAAAACTGCTGCAAAAACGCTGCGACGGATAATGGATTCACAAACGGGTT
AAATGGTGAGGATGTGGTAAACGGTAAAGGTGTTTCCACTGAAATCTGCTTCACCAAATA
CGACCCAACTCAGCAAATCATTTTTCCACCAGAGTTATTGATGAAAGGAAAATCCCAACA
TATTGAGGCGCTTAAGTTTACCGGGGAGCGGGTCACGTGGTTTCGACCAATTTTGCTGGA
ACACCTCGTTGAGTTAAAGGGGAAATACCCGGATGCACAACTGGTGAACGGTAACACAGA
GGTCGGGGTTGAAACAGGGGTCAAAGGTCGACTTTATCCGGTGATGATTTCACCATCAGC
CGTTGATGAACTCAGAAGCATCCAAATGGATAAAAACGGTGTAAACGTGGGAGCTTCTTG
CACGTTAAGCGAACTCCGAGAGAGTTTTGACTCGTTAAGGAAGTTGCGACCGACTGCGGA
AACTCAATGTGTTGCTTCTATTATTGAAATGCTACACTGGTTTGCTGGAGACCAAATAAG
AAACGTTGCTGCGATCGGAGGCAACATAATGACAGCAAGTCCCATCTCTGATCTCAATCC
AATCTTGATGGCAAACGAAAGTATTGCTACGTTCAGATTACATTCTCGTGCTAAAGATCG
ACAGGTTTTCATGGATCAAAGTTTCTTCCCCAAATACAGGACGACATGTGCAGAGAAGGG
CGAAGTTCTGCTCTCCGTACATCTTCCGTTTAATGGAAAGGACGAGTACATAAAAGCATA
CAAGCAATCGAAGCGACGAGAAGACGATATTGCAATCGTGAATGCAGCCATGCGTGTCGT
CTTTCATCCAGGAACTTGCAAAGTGCTCAAATTTGTTGCTGCATTTGGTGGAATGGCTGC
TACTTCAGTTATGCCAGAAAAGACCATGCAAAATATGATTGGAAGAATGTGGACCGACGA
CTTGATAGATAACTTTGCAGAATGGATAAGTGAAGACTTCCCTTTGAGTCTGGATGCCCC
AGGGGGGATGGTAGAGTACAGGGAAGCTCTAGCAGCAAGTTTGTTTTTCAAATTCTTCCT
GTACGTCAAGAACTGTCTGGTCGAACGCGGAGTAATGGATGAAAAGTTGGCTGAAAGGGA
TTTGTCAGCATTGCATGAAGCTGCCCATATGGATCGACAACTCAAAGGAAAGCAAACTTG
GCAAGAGGTTAAAGTAGAACAGCCACCATTGGATAAGGTTGGGCGATCTCTTCAACATGT
GGCCGGCGAACTTCATGCCACAGGAGAAGCTGTTTATGTCGATGATATTCCACAGTGCAG
CTCTGAGCTGTATCTTTGCCTTGTCACGAGCACTCGGCCACACGCATTCATACGTGAGGT
TGACGTCAGCTTAGCAAGTACCTCACCTGGTTTTGTGACGTATGTTGATCACCGTGACGT
AGGTGGCTCAAACAATATTGCCATTTACCACGCAATGGAAGAAGTGTTTGCAACGGAAAA
GGTAACCTGTATCGGTCAAGTTATTGGAGCAGTTGTAGCTGACTCTCAAGCTCGCGCGCA
AAGAGCTGCTCAGTTGGTGAAAATCGACTACGAAGATATATCACCTGTCGTCATCACAAT
TGAGGAAGCAGTTTCGGAAAAATCGTTTCGAAGCCCAATCCACAAAGTTGTGAAGGGAAA
CGCCGAGGAGACTATGACATCATGTGATCAAGTGATAGAAGGAGAAGTGAGAACTGCAGG
ACAAGAGCATTTTTACATGGAAACGCAAGTTTGCTTGGCAGTCCCAAAAGACGGCGAAGA
AATGGAAGTTTACTCTTCAAACCAAGACCCTGAAGCTTTACAAAAGACGTCATCAGCCGT
ATTGGGAGTTGGACAAAACAAGGTTCAGGTTCGAGTTAAGAGACTTGGCGGGGGCTTTGG
AGGAAAAGCTACTCGTTTTTTGTTGCTTAGCAGTCCCGTTATTGTCGCCGCTGCCAAGTG
TGGGAAGCCAGTAAGATGCATGCTAACCAGACAAGAAGATATGTCGATTACAGGAACAAG
ACACCCCTTCCTCGGAAAATACAAGATTGGATGTACTAAAGAAGGCCGCTTGGTTTCGCT
AGTGTTAGATTTATTTAGCAATGGTGGAAATACACAGGATTCATCCATGTATGTGATGGC
CAAAGCGATGATAAATAGCGATAACTGCTACTGCATACCGAATATGCTAATTCGTGGGAC
TGTGTGCAAAACCAACATTGTTTCAAACACCGCTTTCCGAGGGTTCGGCGCCCCACAAGC
AATGTTTATTGCCGAAAGTTGGATCACTGCAGTTGCAGAGAGGCTGGGACTTTCGACCGA
AAAGGTTAGAGAAACGAACTTATACAGAGCTGGAGACTTGACCCATTTCAATCAAGTTTT
GGAAACCTCAAACGCACGACGCTGTTGGGAAGAATGCATGAAAATATCCCAGTTTGATAA
GAGACGTATAGAAGTTGACGCCTACAACAGTAAAAACAGGTGGAGAAAAAGAGGGCTGGC
ATGCGTGCCAACAAAGTTTGCAATAGGAATCAAAGAATACCGTTGTCAAGCGGGGGCACT
AATAAACATTTACACGGACGGTTCAGTTTACTTAACACACGGTGGAACCGAAATGGGTCA
AGGACTGCATACAAAAATGATACAGATTGCTAGTCGTTGTCTTGGAATTCCCGTTTCCCG
TATCCACATATCGGAGACGAGCACAACTCACGTTCCAAACGGGGGAACAACCGCTGGGAG
TCTGGGATCGGACATGAACGGAATGGCTGTAAAAGCGGCCTGTGATGAAATAGTATCACG
ACTTGCGCCAATCCGGAAAAAGTTTCCAGAACTTTCGTGGGACAAATTGATTTTACAAGC
TTACATGGAGCGAGTTAGTTTATCTGCTACGGGATTTTACAGAATTCCCGATATGTACAG
CAACTGGGATGTGCACACCGGAACCGTAAAAGGTCGTCATTCAAACTACTACACTTACGG
TGCAGCTGTCTCTGAAGTCGAGGTGGACTGCTTGACCGGTGATCACGTGGTGCTTCAAAC
TGACATTGTAATGGACGTAGGGAAAAGCCTTAATCCAGCCATCGATATTGGACAGATTGA
AGGGGGGTTTGTTCAGGGTTATGGTCTGTTTACGATGGAAGAGCCTTTGCATACATCTAA
TGGGCGACTTATCACAGTTGGACCAGGTGCTTACAAAATTCCTGGCTTCGGGGATTGCCC
CAAGGAGTTTAATGTCCATTTGCTGGGAAATTCGGAAAACGATAAAGCAATCTATTCGTC
CAAGGCTGTGGGAGAACCGCCGCTATTTCTCGCTGCCTCGGCATTTTTCGCAATTAAAGA
CGCCGTCGGAAGTGCTCGGAATGATTCGGGATTACATGGAAGGTTTCGGATGGACGCCCC
AGCGACTGCCGAACGCATCCGAATGACTTGCGGTGACAGATTTGTTCGTCAGCATAGAAA
TCACGCCACGGCTGAAGAAGATGAAAGC
| PIRSF |
Ald_Oxase/xanthine_DH (IPR016208) - T[12-1352] 0.0 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[18-105] 9.382 |
| TIGRFAM |
Xanthine_DH_ssu (IPR014307) - T[20-544] 6.5E-152 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[21-105] 8.13E-20 |
| Pfam |
2Fe-2S_ferredoxin-type (IPR001041) - T[23-91] 1.3E-6 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[57-65] . |
| Pfam |
2Fe-2S-bd (IPR002888) - T[101-174] 3.8E-29 |
| SUPERFAMILY |
2Fe-2S-bd_dom_sf (IPR036884) - T[113-199] 3.14E-32 |
| SUPERFAMILY |
FAD-bd_2-like_sf (IPR036318) - T[221-434] 3.87E-53 |
| ProSiteProfiles |
FAD-bd_2 (IPR016166) - T[250-437] 20.393 |
| Pfam |
Mopterin_DH_FAD-bd (IPR002346) - T[255-434] 2.8E-40 |
| SUPERFAMILY |
CO_DH_flav_C_dom_sf (IPR036683) - T[438-548] 1.7E-31 |
| SMART |
CO_DH_flav_C (IPR005107) - T[442-546] 1.4E-21 |
| Pfam |
CO_DH_flav_C (IPR005107) - T[442-545] 5.4E-28 |
| SUPERFAMILY |
Ald_Oxase/Xan_DH_a/b_sf (IPR036856) - T[582-719] 2.62E-36 |
| SMART |
Ald_Oxase/Xan_DH_a/b (IPR000674) - T[611-718] 1.3E-33 |
| Pfam |
Ald_Oxase/Xan_DH_a/b (IPR000674) - T[611-716] 5.7E-30 |
| SUPERFAMILY |
AldOxase/xan_DH_Mopterin-bd_sf (IPR037165) - T[719-1339] 7.33E-190 |
| Pfam |
AldOxase/xan_DH_Mopterin-bd (IPR008274) - T[739-1264] 1.8E-187 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| XDH_HUMAN | 52.663 % | 1340 | 0 |
| AOXA_HUMAN | 44.786 % | 1139 | 0 |