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  1. Transcript 'KH2012:KH.C6.303.v1....' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1120.g13764.02.t

Possible name(s)

SCFD1; STXBP1; VPS45

Gene model

Phmamm.CG.MTP2014.S1120.g13764

Location

S1120 [47,219 / 49,121]

Sequences

Amino acid sequence

Length: 633

>Phmamm.CG.MTP2014.S1120.g13764.02.p
MSSTIRDRQIAALKCMLNLGKVATKKSAIEPEWKVLIYDQHGQDIISPLLSVAELRDLGI
TLYLPLESARDAISDVTAVYFVVPNDENISRICQDMKDKLYDNYHFNFISAISRTKLEDV
ATAALQSDADTQMIKIFDQYINFVTLEKDLFVIKGKGDRLSSYHNLNKSDLKDYEMMSII
DSMVDSLYCVFVSMGAMPIIRCPPGNAAEMVAEKLDKRFRDNLRDARNSFFSSMPGSVGD
HGQQFSTFQRPLLLILDRNVDLATPLHHTWTYQSLVHDVMDFNLNSVTIVEESGAASTSQ
SRKKTQVFSLGQNDKFWQQYKGNPFPEVAQAVQEEIEEYKGHEEEVQRLKSAMGLSDTDS
GPVDISDNTAKLTSAMSSLPELLEKKRLIDMHTTIATAVLGSIKERKLDEYFEMEEKIMN
KSASEKALLDLINDPVGGTPEDKMRMFLIYFLCQATNETNLDQFTQALEGAGCDMSPIKY
IKRWRQYSMPSTSSQQQYRGGGTKTVNMFSHLMSTGSQFVMEGVKNLVIKKHNLPVTKIL
DSLMELKNSSETEKYRYFDPKILRSVDSGAGRTKLPYSDAVVFVVGGGNYIEYHNLMEYS
KSKTGKRISYGCSELANASQFLRQLSLLGKELE

Nucleotide sequence

Length: 1,902

>Phmamm.CG.MTP2014.S1120.g13764.02.t
ATGTCCTCTACGATAAGGGATAGGCAAATTGCTGCTTTGAAGTGTATGCTAAACTTAGGC
AAAGTTGCCACCAAAAAATCTGCCATAGAACCAGAGTGGAAGGTACTTATATATGACCAA
CATGGACAGGACATTATTTCTCCATTACTCTCTGTTGCTGAACTTCGAGATTTGGGTATT
ACATTGTATTTGCCCCTAGAAAGTGCTCGGGATGCAATATCAGATGTCACTGCAGTATAT
TTTGTGGTTCCAAATGATGAAAACATATCAAGGATTTGCCAAGACATGAAAGACAAACTG
TATGACAACTACCATTTTAACTTCATATCAGCTATCTCTAGGACCAAATTGGAAGATGTT
GCAACAGCTGCATTACAAAGCGATGCTGACACTCAAATGATAAAGATTTTTGATCAATAC
ATTAATTTTGTCACCCTTGAAAAGGACCTGTTTGTGATAAAAGGCAAAGGTGACAGGCTA
TCCTCATATCACAATCTAAACAAATCTGATCTTAAAGACTATGAAATGATGTCTATCATT
GACTCCATGGTGGATAGCTTGTACTGTGTATTTGTCAGTATGGGAGCTATGCCAATTATT
AGGTGTCCTCCAGGAAATGCTGCTGAAATGGTTGCAGAAAAACTTGACAAGCGATTTCGA
GATAATTTAAGAGATGCAAGAAACAGCTTTTTTAGTTCAATGCCTGGTTCTGTTGGGGAT
CATGGTCAACAGTTTTCCACATTCCAACGTCCTCTCTTGCTCATTCTTGACAGAAATGTT
GATCTTGCAACTCCTCTGCACCACACATGGACCTACCAGTCCCTAGTCCATGATGTAATG
GATTTTAATTTGAATAGTGTGACCATAGTGGAAGAATCTGGAGCAGCGTCAACAAGTCAG
AGTCGCAAAAAGACTCAAGTTTTTAGTTTGGGTCAGAATGACAAATTCTGGCAGCAATAC
AAAGGTAATCCTTTTCCTGAAGTCGCTCAAGCTGTCCAGGAGGAAATTGAAGAGTATAAG
GGCCACGAAGAAGAGGTTCAAAGGTTAAAATCTGCAATGGGCTTGTCTGACACTGACTCT
GGTCCTGTTGATATATCAGATAACACTGCAAAGCTTACATCTGCAATGAGTTCACTTCCA
GAACTGCTAGAAAAAAAGAGGTTAATTGACATGCACACAACCATTGCCACAGCCGTTCTT
GGCAGTATTAAGGAAAGGAAACTGGATGAATACTTTGAAATGGAAGAGAAGATTATGAAC
AAATCTGCATCGGAAAAGGCTTTGTTGGACCTGATCAATGATCCTGTTGGGGGAACTCCA
GAAGATAAAATGAGGATGTTTCTGATTTACTTTTTGTGCCAGGCCACAAATGAAACAAAC
TTGGACCAATTTACCCAAGCACTTGAAGGAGCTGGTTGTGACATGTCTCCTATTAAATAT
ATAAAGCGCTGGAGACAATACAGCATGCCCTCCACAAGTTCACAGCAGCAATACAGAGGA
GGAGGAACAAAAACTGTTAATATGTTCTCACACCTCATGAGCACTGGTTCCCAATTTGTT
ATGGAAGGAGTGAAAAACCTTGTGATCAAAAAACATAACCTTCCTGTTACGAAAATTTTA
GACTCACTTATGGAGCTTAAAAATAGTTCTGAAACTGAAAAGTATCGCTATTTTGACCCC
AAAATCTTACGATCTGTTGATTCAGGGGCTGGAAGGACAAAACTACCATACTCTGATGCT
GTAGTGTTTGTAGTTGGTGGAGGAAACTATATTGAATACCACAATCTAATGGAATACAGC
AAAAGTAAAACTGGAAAAAGAATTTCCTATGGCTGCAGTGAGCTTGCAAATGCTTCACAA
TTTTTAAGGCAACTTTCCTTGTTGGGAAAAGAACTTGAATAA

InterProScan

SUPERFAMILY
Sec1-like_sf (IPR036045) - T[1-631] 1.83E-146
PANTHER
Sec1-like (IPR001619) - T[2-629] 1.0E-234
PIRSF
Sec1-like (IPR001619) - T[7-633] 2.9E-61
Pfam
Sec1-like (IPR001619) - T[34-624] 2.0E-119
Gene3D
Sec-1-like_dom2 (IPR027482) - T[146-626] 9.1E-135

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VPS45_HUMAN 21.875 % 110 2.4E-25
SCFD1_HUMAN 59.528 % 771 0