Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,220

>Phmamm.CG.MTP2014.S112.g03457.01.p
MLTKFESKSARVKGLSFHPKRPWVLSSLHNGAIQLWDYRMCTMIDKFEEHDGPVRGICFH
NQQPLFVSGGDDYKIKIWNYKLRRCLFTLLGHLDYIRTTVFHHDYPWILSASDDQTIRIW
NWQSRSCIAVLTGHNHYVMSANFHPSEDLVVSASLDQTARVWDIAGLRKKNLSPNSGPDE
SVRGTGVGGPASIELFGSTDVMIKHVLEVCCKFWILACHPTLNLFAAGHDGGMVIFKLER
ERPAFATHENFLYYVKDKYLRKLDFTTSKDTPAMQLRSGSKTSVYSMSYNPVENAVVITS
RASNIENSHYDLYQIPKTTDSSNPDAPEGKRSSGLTAVWVARSRFAVLDRTHTIVIKNHK
NEITKKVQVPAVDEIFYAGTGSLLLRTPEGITLYDVQQKRALASVKLTKVKYVVWSNDMS
HVALLAKHNIAICNRKLESLATIHENVRVKSGAWEESGVFIYTTSNHIKYALTNGDHGII
RTLDLPIYITRVKGTSVYCLDRETRPRVLSIDPTEFRFKMALVNRKYDEVLHMVRNTKLV
GQSIIAYLQQKGYPEVALHFVKDDKTRFSLALECGDIEVALAAAKALDDKQCWVALGEVA
LAHGNHQVVEMAYQRTKDFDKLSFLYLLTGNLEKLRKMMKIAEIRKDTSGHYQAALYLGD
VAERVKVLRGCGQKSLAYLTAATHGLEEEAEQLKDEVVPDIDPNAVLLQPPPPIKQCEEN
WPLLTVSKEAEQLKDEVVPDIDPNAVLLQPPPPIKQCEENWPLLTVSKEEFEDAEEGEDT
GGGWDVDDDDLELPADLDIAPDDGAHGEGFFVAPTKGFFHENRNKGGTVGALNADDMDAD
VGGWGEDVEIIIDDEGGIVEEEFEDAEEGEDTGGGWDVDDDDLELPADLDIAPDDGSHGE
GFFVAPTKGTSQCQVWCNNSQLAVDHILAGSFDTAFRLLHDQVGVTDFQPYKTLFTQTFA
RGRTAFTGIPGLPPMNSYPHRNWREAGAKGGLPVVGLSLAVLATRLQDAYKLTTQGKFDD
AIVKFRDILLSVPLLVVDNKQEISEAQQLITICREYIVGLSMEQLRKSLPKASLDDQKRT
CEMAAYLTHCQWQPIHLILALRTAQNLFFKLKNYKTAASFARRLLELGPKPDVASQTRKI
IAACEKNPRDTHELLYDAHNPFDICAATYVPIYRGKPVEKCPLSGACYTPAHKGEICRVT
KCTEIGKDCVGLRVSSIQFR

Nucleotide sequence

Length: 3,663

>Phmamm.CG.MTP2014.S112.g03457.01.t
ATGTTGACAAAATTTGAATCCAAGTCTGCTCGTGTGAAAGGGTTGTCTTTTCACCCAAAA
CGACCATGGGTTTTGTCTTCACTTCACAACGGAGCAATTCAGTTATGGGATTACAGAATG
TGCACCATGATCGACAAATTCGAGGAACATGATGGCCCTGTCAGAGGAATTTGTTTCCAC
AATCAGCAACCATTGTTTGTATCTGGTGGTGATGATTACAAAATAAAGATATGGAACTAC
AAGCTTAGAAGATGCCTGTTTACTTTACTTGGTCATTTGGATTACATTCGAACAACAGTT
TTCCATCATGACTATCCCTGGATTCTTTCTGCTTCTGATGATCAGACAATCCGGATTTGG
AACTGGCAATCCCGCTCTTGTATTGCTGTCCTTACTGGCCACAACCATTATGTGATGTCC
GCTAACTTCCACCCCTCTGAAGACTTGGTGGTTTCTGCTTCATTGGATCAAACAGCAAGA
GTATGGGACATAGCTGGTTTGCGCAAGAAGAATCTCTCCCCGAATTCTGGTCCAGATGAA
TCAGTTCGTGGTACAGGTGTTGGGGGACCTGCCTCAATTGAGTTGTTTGGTAGCACTGAC
GTAATGATTAAACATGTGCTTGAGGTATGTTGCAAGTTTTGGATTTTGGCATGCCACCCA
ACTTTGAATCTGTTTGCTGCTGGCCACGATGGTGGAATGGTGATTTTCAAACTGGAACGT
GAACGACCAGCGTTTGCTACTCACGAGAACTTCCTCTACTATGTGAAAGACAAATATCTT
CGCAAGTTGGATTTTACTACAAGCAAAGACACACCTGCAATGCAGCTCAGAAGTGGTTCA
AAGACATCGGTTTATTCCATGTCTTACAATCCAGTTGAAAATGCTGTTGTCATCACATCG
CGTGCATCCAACATCGAAAACTCTCATTACGATCTTTATCAAATTCCCAAAACAACTGAT
TCGTCCAATCCTGATGCACCTGAAGGAAAACGATCATCTGGGTTGACTGCAGTGTGGGTG
GCCAGAAGCAGGTTTGCCGTGCTTGACAGAACACACACCATTGTCATTAAAAACCACAAG
AACGAAATCACCAAGAAGGTTCAGGTTCCAGCTGTTGATGAGATATTTTACGCCGGCACT
GGTTCTTTGTTACTTCGCACTCCAGAAGGCATTACACTCTATGATGTTCAACAAAAAAGA
GCACTGGCATCTGTGAAGCTTACCAAAGTGAAGTATGTGGTTTGGTCCAATGATATGTCA
CATGTTGCACTCTTGGCTAAACACAACATTGCAATTTGCAATCGTAAACTGGAATCGCTT
GCCACGATCCACGAAAATGTGCGTGTGAAGTCAGGAGCATGGGAAGAAAGTGGTGTGTTT
ATCTACACTACTTCTAATCACATCAAATATGCTCTTACTAATGGTGATCATGGCATCATT
CGAACCCTGGACCTTCCCATCTATATAACAAGGGTTAAGGGCACAAGTGTTTATTGCTTG
GATCGAGAAACTCGTCCTCGAGTTCTTTCCATCGACCCAACGGAATTTAGATTCAAGATG
GCACTTGTGAATCGCAAATACGATGAAGTTCTACACATGGTTCGTAACACCAAGCTGGTC
GGACAATCGATCATTGCTTACTTGCAACAGAAAGGATACCCAGAAGTTGCTCTACACTTT
GTCAAGGACGACAAAACAAGGTTTTCATTGGCTCTAGAGTGTGGAGATATTGAGGTGGCA
TTAGCTGCTGCAAAAGCACTTGATGACAAGCAATGCTGGGTTGCACTCGGAGAAGTTGCA
CTTGCTCATGGGAACCACCAAGTGGTAGAAATGGCTTATCAGCGAACCAAGGATTTCGAC
AAGCTCTCGTTTCTGTATTTGCTCACTGGAAATCTTGAAAAGTTGAGAAAAATGATGAAA
ATCGCTGAAATCAGAAAGGATACATCAGGTCACTACCAGGCTGCTCTTTATCTCGGAGAT
GTAGCAGAGCGAGTAAAGGTTCTTCGTGGATGCGGACAAAAGTCGCTTGCTTATCTTACT
GCTGCTACACATGGTTTAGAAGAAGAAGCAGAGCAGCTCAAAGATGAAGTAGTCCCAGAT
ATTGATCCCAACGCAGTCCTTCTTCAACCACCACCTCCCATCAAACAGTGTGAAGAAAAT
TGGCCGTTACTGACTGTCAGCAAAGAAGCAGAGCAGCTCAAAGATGAAGTAGTCCCAGAT
ATTGATCCCAATGCAGTCCTTCTTCAGCCACCACCTCCCATCAAACAGTGTGAAGAAAAT
TGGCCGTTACTAACTGTCAGCAAAGAAGAGTTTGAGGATGCAGAGGAGGGAGAGGACACT
GGGGGAGGTTGGGATGTTGATGACGATGATCTTGAACTTCCAGCTGATCTTGACATCGCT
CCTGATGATGGAGCTCATGGAGAAGGATTCTTTGTTGCTCCGACGAAAGGATTCTTCCAT
GAGAACAGAAACAAGGGAGGCACAGTCGGAGCTCTCAACGCAGATGACATGGACGCAGAT
GTTGGAGGATGGGGAGAAGATGTTGAGATCATCATCGATGATGAGGGAGGGATCGTGGAA
GAAGAGTTTGAGGATGCAGAGGAGGGAGAGGACACTGGAGGAGGTTGGGATGTTGATGAT
GATGATCTTGAACTTCCAGCTGATCTTGACATCGCTCCTGATGATGGATCTCATGGAGAA
GGATTCTTTGTTGCTCCCACAAAAGGAACATCTCAATGCCAGGTATGGTGCAACAATTCA
CAACTTGCTGTGGACCACATACTTGCCGGATCCTTTGACACTGCGTTCAGGTTGCTACAT
GACCAAGTTGGGGTCACTGACTTTCAACCGTACAAGACCCTCTTTACCCAAACATTTGCA
CGGGGACGTACGGCTTTTACGGGGATTCCCGGTCTACCCCCTATGAACAGTTACCCGCAT
CGGAACTGGCGAGAAGCAGGGGCCAAAGGGGGACTTCCCGTCGTGGGTTTGAGTCTTGCT
GTGTTAGCTACAAGACTACAGGATGCTTACAAACTGACCACACAAGGAAAGTTTGATGAT
GCAATTGTGAAATTCCGTGACATTCTTTTATCTGTTCCACTTTTGGTGGTCGACAACAAG
CAGGAAATAAGTGAGGCTCAACAGCTGATTACGATTTGCCGGGAATACATCGTCGGACTT
TCAATGGAACAACTTCGTAAATCTCTTCCCAAAGCGAGTTTGGATGATCAGAAGCGAACA
TGTGAAATGGCAGCTTACCTCACACACTGTCAGTGGCAACCTATTCATCTCATACTTGCA
CTGAGAACAGCACAAAATCTATTCTTTAAGCTGAAAAACTACAAGACTGCCGCGTCATTT
GCGCGTCGACTTCTGGAGCTGGGTCCCAAACCGGATGTTGCATCACAAACGCGAAAGATA
ATCGCGGCTTGTGAGAAAAACCCACGTGACACACACGAGTTGCTTTATGACGCACACAAT
CCATTCGATATCTGCGCGGCGACATATGTTCCAATATACAGGGGCAAACCGGTTGAAAAA
TGTCCGCTAAGTGGCGCATGTTACACTCCCGCCCACAAAGGGGAAATTTGCCGAGTCACG
AAATGCACAGAGATAGGAAAAGATTGTGTTGGTCTGAGGGTTAGCTCTATACAATTCCGC
TAA

InterProScan

Gene3D	WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-239] 1.3E-78
PIRSF	Coatomer_asu (IPR016391) - T[1-212] 1.2E-129 - T[210-824] 1.6E-232 - T[726-1216] 1.0E-116
SMART	WD40_repeat (IPR001680) - T[2-37] 10.0 - T[40-79] 2.0E-6 - T[82-121] 3.0E-7 - T[124-163] 1.7E-9
SUPERFAMILY	WD40_repeat_dom_sf (IPR036322) - T[4-303] 1.38E-47
ProSiteProfiles	WD40_repeat_dom (IPR017986) - T[5-172] 37.545
ProSiteProfiles	WD40_repeat (IPR001680) - T[5-39] 9.138 - T[47-88] 12.48 - T[89-130] 12.714 - T[131-164] 14.652
Pfam	WD40_repeat (IPR001680) - T[46-79] 2.2E-5 - T[84-121] 2.3E-7 - T[126-163] 7.6E-6
PRINTS	G-protein_beta_WD-40_rep (IPR020472) - T[66-80] 9.0E-5 - T[108-122] 9.0E-5 - T[150-164] 9.0E-5
ProSitePatterns	WD40_repeat_CS (IPR019775) - T[150-164] .
Pfam	Coatomer_WD-assoc_reg (IPR006692) - T[263-685] 1.1E-138
Pfam	Coatomer_asu_C (IPR010714) - T[816-1220] 5.7E-175