- Transcript 'Haaura.CG.MTP2014.S5...' >
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- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S113.g03460.01.t
Possible name(s)
CALM1; TNNC1; TNNC2
Gene model
Location
S113 [45,134 / 46,755]
Amino acid sequence
Length: 162
>Phmamm.CG.MTP2014.S113.g03460.01.p
SMTVEDARASLTKDQISEFKQAFDIFDEDGGGDISTSELGRVMKMLGQTPNREELAKIVE
EVDVDGSGTIDFDEFLIMMVMQIAEEGKTASEEELKDLFRLLDRDGDNYIDWDELREALE
GVSADPPIENWEIDELLKEADKNGDGVIDVEEWGIWMDGVQA
Nucleotide sequence
Length: 489
>Phmamm.CG.MTP2014.S113.g03460.01.t
TCTATGACAGTCGAAGACGCCCGTGCATCCCTGACGAAAGATCAAATTTCAGAGTTCAAA
CAGGCTTTCGACATCTTTGATGAGGATGGCGGTGGCGACATCAGTACCAGTGAATTGGGT
CGCGTCATGAAAATGTTGGGACAAACTCCAAACCGAGAGGAGCTTGCAAAAATTGTTGAA
GAAGTTGACGTTGACGGCAGCGGAACAATCGATTTCGATGAGTTTCTTATCATGATGGTG
ATGCAGATTGCAGAAGAGGGAAAAACGGCAAGCGAAGAGGAATTAAAAGATCTATTCCGT
TTGCTTGACAGAGACGGAGACAACTACATTGATTGGGACGAGCTTCGTGAAGCTTTGGAG
GGCGTTTCTGCTGATCCACCTATTGAGAATTGGGAAATTGACGAACTTTTGAAGGAGGCC
GACAAAAATGGTGACGGAGTGATTGATGTCGAAGAGTGGGGAATTTGGATGGACGGTGTA
CAGGCCTAA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[10-159] 4.98E-41 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[14-49] 13.37 - T[50-85] 13.704 - T[90-125] 16.131 - T[132-162] 9.185 |
| SMART |
EF_hand_dom (IPR002048) - T[18-46] 1.2E-4 - T[54-82] 9.9E-5 - T[94-122] 2.8E-4 - T[132-160] 2.3E-4 |
| Pfam |
EF_hand_dom (IPR002048) - T[18-79] 2.4E-11 - T[92-152] 2.8E-13 |
| CDD |
EF_hand_dom (IPR002048) - T[18-79] 4.16763E-17 - T[94-153] 2.9375E-13 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[27-39] . - T[63-75] . - T[103-115] . - T[141-153] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALM1_HUMAN | 47.552 % | 134 | 7.72E-41 |
| TNNC1_HUMAN | 52.532 % | 146 | 1.78E-45 |
| TNNC2_HUMAN | 55.769 % | 168 | 2.96E-54 |