- Transcript 'KH2012:KH.C4.401.v3....' >
- Clone 'cien55886' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1145.g13869.01.t
Possible name(s)
HMCN1; HMCN2; TTN
Gene model
Location
S1145 [18,605 / 24,390]
Amino acid sequence
Length: 620
>Phmamm.CG.MTP2014.S1145.g13869.01.p
MATFHIASVIVLLSAVSLVQGNDLVASYLSSASIPCNVSIPESASVFAVTWNHNGAVVVT
YGANIAHFQEDYASRAEFDEVSYTLTLNDLGFDDDGMFKCTVTSSSGPFTSQNSLSVLAS
PKVETQAFDVLDDGTGQTKKLAECKATGASKPFSMKWVTDMNDEVVPDNFRVESENPTFN
NLFDAVLPLTIHPDPERNNGRTFTCVVEDAFGDVIPTDVVLTVSASPNVVEFPTPNDNAV
VTMEIGAQSQFKCNIAGVPTPTVSWYRNGKKIVTDTGIVVLSVSIESFDDAATYTCRGTN
NAGKISRMFSISVQGPPEMEVPLEFQNKSEEILVNPTMSNIEISCEAEAKPKPNIRWSIE
GLNESDFEVVEEMLGGIVRSVVNITSSGLDKKPTSAECTAENKLGKEERKFYIRYPVAEA
NTALVVGVVMAVLVLLAIVFFIVFFSLTRRQQKDVDVTKPSDTESGCVICAPGCFAATPC
GNKTTKDEIQEEVEGDQVKEVKEEGTSEEKQKLTEAEEKPAAENDSKSEDGTDDKAQEEV
DGAAEPKTSKKKLKISLPTQCCRGNKQELKEESCDDENEVKEGSDENGETPKEKSQQPTD
KDSGKGDTLEKVIEEPVETK
Nucleotide sequence
Length: 1,863
>Phmamm.CG.MTP2014.S1145.g13869.01.t
ATGGCGACGTTTCATATTGCATCTGTAATTGTTCTACTTTCTGCAGTTTCACTTGTCCAG
GGAAACGACTTGGTCGCCAGCTACTTGTCAAGTGCTTCTATTCCATGTAATGTCAGCATC
CCTGAGTCTGCTTCAGTGTTTGCTGTGACGTGGAATCACAACGGAGCCGTGGTCGTTACA
TATGGAGCAAACATAGCACATTTTCAAGAAGACTACGCATCTAGGGCAGAATTCGATGAA
GTTAGCTATACGTTGACATTGAACGACCTTGGTTTCGACGATGACGGAATGTTCAAGTGC
ACAGTTACATCAAGTTCAGGCCCTTTTACATCCCAAAACTCCCTGAGTGTTCTAGCTTCA
CCCAAAGTGGAAACACAGGCATTTGATGTTCTTGATGACGGAACCGGTCAGACCAAAAAA
CTGGCAGAGTGCAAAGCAACGGGTGCAAGCAAACCTTTTTCCATGAAATGGGTTACGGAC
ATGAACGACGAAGTGGTGCCAGACAACTTTCGAGTGGAATCTGAAAACCCAACTTTCAAC
AACCTCTTCGACGCCGTTTTACCTTTAACTATTCACCCAGACCCCGAGAGAAACAATGGA
CGCACTTTCACTTGCGTAGTTGAAGACGCTTTTGGTGACGTAATCCCGACGGACGTCGTT
CTCACTGTTTCAGCCTCGCCCAATGTTGTGGAGTTTCCCACACCGAACGATAACGCAGTG
GTTACCATGGAAATAGGTGCTCAGTCGCAGTTTAAATGCAACATCGCTGGTGTACCTACG
CCCACTGTTTCATGGTATCGCAACGGAAAGAAGATTGTAACAGACACTGGAATTGTCGTC
CTCAGCGTTTCTATCGAATCTTTTGATGATGCTGCAACTTACACTTGCCGAGGAACAAAC
AATGCCGGAAAAATTAGCAGAATGTTTAGCATTTCAGTACAAGGTCCACCAGAGATGGAA
GTTCCACTTGAATTTCAAAATAAGAGCGAAGAAATTCTGGTGAACCCAACTATGTCGAAC
ATTGAGATTTCCTGCGAAGCCGAAGCGAAACCCAAACCCAACATTCGCTGGTCAATTGAG
GGTTTGAATGAAAGTGATTTCGAAGTGGTTGAGGAGATGTTGGGAGGCATTGTTCGATCA
GTTGTCAACATAACTTCTAGCGGATTAGACAAAAAGCCAACAAGTGCTGAGTGTACGGCC
GAAAACAAACTCGGAAAGGAGGAAAGAAAATTTTACATTCGATATCCTGTAGCCGAAGCA
AACACAGCATTGGTTGTTGGAGTTGTTATGGCGGTTCTAGTTTTGCTTGCGATCGTTTTC
TTTATCGTTTTCTTTTCTTTGACCCGACGCCAACAAAAGGATGTAGATGTTACGAAACCG
AGTGACACAGAATCTGGTTGCGTGATTTGCGCTCCCGGATGTTTCGCTGCGACCCCTTGT
GGAAACAAAACTACCAAAGACGAAATCCAGGAAGAGGTAGAAGGCGACCAAGTGAAAGAA
GTAAAAGAAGAAGGGACTTCTGAGGAAAAACAGAAATTAACAGAAGCTGAGGAAAAACCA
GCTGCTGAAAACGATAGCAAATCGGAAGACGGAACTGATGACAAAGCACAGGAAGAGGTT
GATGGAGCTGCTGAACCCAAAACAAGCAAAAAGAAGTTGAAGATCTCGTTGCCAACTCAA
TGTTGTCGTGGAAACAAGCAAGAACTTAAAGAAGAATCCTGTGACGACGAAAATGAAGTT
AAGGAAGGCAGTGATGAAAACGGAGAAACCCCGAAAGAAAAAAGCCAACAACCAACTGAT
AAAGACTCTGGGAAAGGAGATACCCTCGAAAAAGTCATAGAAGAACCAGTCGAAACCAAA
TAG
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[7-116] 10.535 - T[121-222] 8.629 - T[227-312] 12.967 |
| Gene3D |
Ig-like_fold (IPR013783) - T[20-128] 4.7E-14 - T[135-227] 8.9E-6 - T[228-319] 2.7E-14 - T[325-420] 1.1E-7 |
| SMART |
Ig_sub (IPR003599) - T[21-118] 0.0079 - T[238-314] 0.0025 |
| SMART |
Ig_sub2 (IPR003598) - T[27-107] 1.5 - T[244-303] 3.3E-7 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[27-122] 1.67E-10 - T[115-229] 6.84E-7 - T[234-318] 6.79E-15 |
| Pfam |
Ig_I-set (IPR013098) - T[241-312] 6.3E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 26.979 % | 87.8 | 9.13E-18 |