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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C12.368.v1...' > 
  2. Clone 'AHC0AAA149YH01' > 
  3. Clone 'CCTT1351' > 
  4. Transcript 'KH2012:KH.C3.205.v1....' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S115.g03513.01.t

Possible name(s)

ADIPOQ; COL8A2; COLQ

Gene model

Phmamm.CG.MTP2014.S115.g03513

Location

S115 [177,037 / 178,741]

Sequences

Amino acid sequence

Length: 146

>Phmamm.CG.MTP2014.S115.g03513.01.p
MLMQLIAILTCFMSLVNGQQKCSYVNVASCGDDVTVTPGSLLSSKGEKGDVGPPGKLGPR
GKPTPGSKGPVGPKGEVGLPGGLGPRGIPGIKGEKGEALDLEEFKQEMRKKLQGLDEIHT
LTNGQNCKLRVDLVGFDGSKAFAQYK

Nucleotide sequence

Length: 441

>Phmamm.CG.MTP2014.S115.g03513.01.t
ATGCTCATGCAATTGATTGCGATTCTGACGTGCTTTATGTCACTGGTCAACGGACAACAA
AAGTGCAGTTACGTCAACGTTGCATCATGTGGCGATGACGTCACTGTGACACCTGGGAGC
TTGCTAAGTAGCAAAGGTGAAAAGGGAGACGTTGGCCCGCCTGGAAAGTTGGGTCCTAGA
GGAAAGCCAACCCCTGGGTCGAAGGGGCCAGTGGGTCCTAAAGGGGAAGTTGGTTTGCCT
GGTGGGCTGGGACCGAGGGGAATACCCGGCATAAAGGGTGAAAAAGGAGAAGCGTTAGAT
TTGGAAGAATTCAAGCAGGAAATGAGAAAAAAACTTCAAGGTTTAGATGAAATACACACG
TTGACAAATGGACAGAATTGCAAGTTGAGAGTTGACTTAGTTGGATTTGATGGATCTAAA
GCTTTTGCACAATACAAGTAA

InterProScan

Pfam
Collagen (IPR008160) - T[45-97] 5.3E-7
Gene3D
Fibrinogen_a/b/g_C_1 (IPR014716) - T[95-146] 8.8E-7
SUPERFAMILY
Fibrinogen-like_C (IPR036056) - T[114-145] 1.57E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value