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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Transcript 'KH2012:KH.L112.12.v2...' > 
  3. Molecular Tool 'NVPBHG712' > 
  4. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S116.g03527.01.t

Possible name(s)

AC090527.2; SQOR

Gene model

Phmamm.CG.MTP2014.S116.g03527

Location

S116 [55,045 / 58,227]

Sequences

Amino acid sequence

Length: 445

>Phmamm.CG.MTP2014.S116.g03527.01.p
MQFSGILRSLTNARVSGTCRYAAHSASTLIAVRNNSTYEVVVAGGGSGGISVGCRLSDKL
GAGNVAIIEPNDTHYYQPLWTLVGGGAKSLSSSAKAMKDVMPPKATWIKNEVKEIDPETN
SVTLENGEKVFYKYLVVALGIKVKFEDIKGLPEAFSTPGVCSNYSPKTVEKTFNALQDFK
EGNAIFTFPKPPLKCPGAPQKIMYLADSYFRKHGKRQNANIMFNTSGPAIFAVKKYAEAL
MKVVEEKDITLNFGLNLVEVKPDTKEAVFEKMSSPEETVSYNYEMLHVSPPCGPLDVVKS
SKIADAAGFVDVNKETMQHVKYPNVFSLGDCSNIPTSKTAAAIACQNAILSKNLLAVRAG
GKAIPSYEGYTSCPLITGYNSCILAEFDFDLQPLETFPINQGKPRWSMYYMKADVMRMIY
WQMLLKGRWSGPKTFRKIMHLGMSR

Nucleotide sequence

Length: 2,246

>Phmamm.CG.MTP2014.S116.g03527.01.t
GCCGCTAGTAAAGAATAGTAATTCATCCCGTAATGTCCAATGTACTATTTTTCGATGTCT
TTTTTCATCTATAGATTTACTGAACAATATGTCTACACCGTTTTTGATTGAATGGAAATA
AAAAAAAAATTGAACAAACTGGGAACAAATCAGCTTGCGGCAATGTGCAGCGGAGCATGA
CCACAAAACAAAACAAACATGGCAAGTGGACGTGGTAACGTGGTATGTTTACCCAATTTT
CTTCGCAATTCAGCTTTTTTCGATCCCATTCAACTTCTTGGGTACAGTACTGCAAATCTA
ATGTGCGCTATAATTTATAAAGACTGAAAGTAAAGTACGTACATTTGCAGTCAGGGCGCC
TACGTGACTTACGACAAAGTCAAGATGGGGAAATAACGTAAACTGATTGTTAAATTTGCT
GAATCATCTACCGGTATATCGTTTTTCTTGTCTACGTGCAAACGTGCAAAGGCCCTTCCA
GATCTGTTACTCGGTTTATTTGAACAGGTTAAAAGCGTGAATCGGTATTTTATGTACTAT
GCAATTCAGTGGAATACTCCGCAGTCTTACAAACGCGCGTGTAAGCGGCACGTGCCGATA
TGCGGCGCATTCTGCATCGACATTAATTGCAGTTAGAAATAACAGCACTTACGAAGTCGT
GGTAGCTGGTGGAGGCTCTGGAGGCATATCTGTTGGATGTCGCCTGAGTGACAAACTTGG
AGCTGGAAATGTTGCTATCATTGAGCCAAACGATACCCATTATTACCAACCACTATGGAC
TTTGGTTGGTGGCGGTGCAAAATCTCTTTCAAGTTCGGCCAAAGCTATGAAAGATGTGAT
GCCACCCAAAGCAACTTGGATTAAAAATGAGGTGAAAGAAATTGATCCTGAAACAAACTC
AGTGACTCTGGAAAATGGTGAAAAGGTTTTTTACAAGTATCTAGTTGTCGCCCTTGGAAT
AAAAGTAAAGTTTGAAGATATCAAAGGTTTACCAGAAGCATTTTCAACACCTGGTGTTTG
TAGTAATTACTCTCCCAAGACAGTAGAAAAAACATTTAATGCACTTCAAGATTTCAAAGA
GGGAAATGCAATTTTTACATTTCCTAAACCACCCTTGAAATGTCCTGGTGCACCACAGAA
GATTATGTATCTTGCTGACTCATATTTCAGGAAGCATGGAAAAAGACAAAATGCAAATAT
CATGTTCAATACTTCTGGTCCTGCGATTTTTGCTGTCAAGAAATATGCGGAGGCATTAAT
GAAGGTTGTGGAAGAAAAGGACATTACCCTGAACTTTGGTTTAAATCTGGTTGAAGTTAA
ACCAGATACAAAGGAGGCTGTGTTTGAGAAGATGTCCTCACCAGAGGAAACTGTATCATA
CAATTATGAAATGTTGCATGTTTCACCACCTTGTGGGCCCTTGGATGTTGTAAAATCCAG
CAAAATTGCTGATGCTGCTGGTTTTGTAGATGTTAACAAGGAGACTATGCAGCATGTGAA
GTACCCTAATGTTTTCTCTTTGGGTGATTGTAGCAATATCCCAACATCTAAAACTGCAGC
TGCAATTGCTTGTCAAAATGCAATTTTGTCAAAGAATCTTCTTGCTGTCAGAGCTGGTGG
CAAAGCAATACCAAGTTATGAAGGATACACATCTTGTCCTCTCATTACTGGCTACAACTC
TTGTATCCTGGCTGAGTTTGACTTTGATCTTCAGCCATTGGAAACGTTTCCTATTAACCA
GGGTAAACCAAGGTGGTCAATGTACTACATGAAAGCAGATGTTATGAGGATGATTTATTG
GCAAATGCTACTCAAGGGTAGATGGAGTGGACCTAAGACCTTCAGAAAGATTATGCATCT
GGGAATGTCCAGGTGAAAAGAACTATGATTGACATACAATGTTGAACACAGCTACTTGCT
TTTTGGAAGAATTCTTCATGGTTTGCAGCCGTTTTTTGGATAACAAGCTTCATCATTTTC
TATCCTTTTTAAGGACTTTTTAGTTGTTTATTTGAACTTTTTATTGCAATAAGTGAGGTG
CATGTTGTAATTTGATTGTAACTGGACACTTAGTCAAACTTTGTTCCAAAATGACTTTGT
TGTTGGTTGGATGTAGGCTTTTTGCTTTTCCTCTAATTCTTAAAAAATGTTACGTGTCGA
TTTGTATTTGCTTCAAATTGTGTAACAGTGCTTATTGCTTACGAGGCATGTTTCTGTACC
TGTTTATAAATAAAATTCATTGGTAG

InterProScan

PANTHER
Sulphide_quinone_reductase (IPR015904) - T[22-443] 8.1E-199
SUPERFAMILY
FAD/NAD-bd_sf (IPR036188) - T[37-179] 1.87E-24 - T[150-291] 4.92E-25
Pfam
FAD/NAD-binding_dom (IPR023753) - T[38-154] 2.2E-9
Gene3D
FAD/NAD-bd_sf (IPR036188) - T[40-356] 1.8E-92 - T[152-291] 1.8E-92

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SQOR_HUMAN 58.213 % 514 0