- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1192.g14032.01.t
Possible name(s)
RPS13
Gene model
Location
S1192 [22,766 / 24,873]
Amino acid sequence
Length: 151
>Phmamm.CG.MTP2014.S1192.g14032.01.p
MGRMHAPGKGLSASALPYRRSVPTWLKLSSDDVKEQIFKLAKKGLRPSQIGVILRDSHGV
AQVRFVTGSQILRILKAKGLAPDLPEDLYHLIKKAVAMRKHLERNRKDTDSKFRLILVES
RIHRLARYYKSKAVLPPTWKYESSTASALVA
Nucleotide sequence
Length: 456
>Phmamm.CG.MTP2014.S1192.g14032.01.t
ATGGGGCGAATGCACGCACCTGGAAAAGGCCTTTCGGCGTCGGCTTTACCATACCGTCGA
AGTGTGCCAACATGGTTGAAGTTGAGCAGCGATGATGTTAAGGAGCAGATATTCAAGTTG
GCTAAGAAGGGTCTTCGTCCATCACAAATTGGTGTGATTCTTAGAGATTCCCATGGGGTT
GCACAGGTTCGATTTGTCACTGGAAGTCAAATACTACGAATTCTTAAGGCCAAGGGTCTT
GCTCCTGATTTGCCAGAGGATTTATACCATCTTATCAAAAAAGCTGTAGCTATGCGTAAA
CACTTGGAAAGAAACCGAAAGGATACTGATTCCAAATTCCGTCTTATTCTCGTGGAGAGC
CGAATTCATCGTTTGGCTCGTTACTACAAGTCAAAGGCAGTTCTTCCACCTACTTGGAAG
TACGAAAGTTCTACAGCTTCGGCTCTTGTCGCATAA
| Pfam |
Ribosomal_S13/S15_N (IPR012606) - T[1-60] 1.0E-30 |
| PANTHER |
Ribosomal_S15P (IPR023029) - T[1-151] 6.2E-82 |
| SMART |
Ribosomal_S13/S15_N (IPR012606) - T[1-60] 1.5E-37 |
| Hamap |
Ribosomal_S15P (IPR023029) - T[3-149] 31.672 |
| SUPERFAMILY |
S15_NS1_RNA-bd (IPR009068) - T[66-142] 1.12E-20 |
| CDD |
Ribosomal_S15 (IPR000589) - T[70-145] 1.76647E-25 |
| SMART |
Ribosomal_S15 (IPR000589) - T[71-149] 1.7E-11 |
| Pfam |
Ribosomal_S15 (IPR000589) - T[75-146] 8.0E-15 |
| ProSitePatterns |
Ribosomal_S15 (IPR000589) - T[98-128] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS13_HUMAN | 90.728 % | 282 | 1.07E-99 |