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- Transcript 'Phmamm.CG.MTP2014.S4...' >
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- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1192.g14032.02.t
Possible name(s)
RPS13
Gene model
Location
S1192 [22,786 / 24,881]
Amino acid sequence
Length: 147
>Phmamm.CG.MTP2014.S1192.g14032.02.p
DIMGRMHAPGKGLSASALPYRRSVPTWLKLSSDDVKEQIFKLAKKGLRPSQIGVILRDSH
GVAQVRFVTGSQILRILKAKGLAPDLPEDLYHLIKKAVAMRKHLERNRKDTDSKFRLILV
ESRIHRLARYYKSKAVLPPTWKYESST
Nucleotide sequence
Length: 444
>Phmamm.CG.MTP2014.S1192.g14032.02.t
CAGACATCATGGGGCGAATGCACGCACCTGGAAAAGGCCTTTCGGCGTCGGCTTTACCAT
ACCGTCGAAGTGTGCCAACATGGTTGAAGTTGAGCAGCGATGATGTTAAGGAGCAGATAT
TCAAGTTGGCTAAGAAGGGTCTTCGTCCATCACAAATTGGTGTGATTCTTAGAGATTCCC
ATGGGGTTGCACAGGTTCGATTTGTCACTGGAAGTCAAATACTACGAATTCTTAAGGCCA
AGGGTCTTGCTCCTGATTTGCCAGAGGATTTATACCATCTTATCAAAAAAGCTGTAGCTA
TGCGTAAACACTTGGAAAGAAACCGAAAGGATACTGATTCCAAATTCCGTCTTATTCTCG
TGGAGAGCCGAATTCATCGTTTGGCTCGTTACTACAAGTCAAAGGCAGTTCTTCCACCTA
CTTGGAAGTACGAAAGTTCTACAG
| SMART |
Ribosomal_S13/S15_N (IPR012606) - T[3-62] 1.5E-37 |
| PANTHER |
Ribosomal_S15P (IPR023029) - T[3-147] 8.2E-79 |
| Pfam |
Ribosomal_S13/S15_N (IPR012606) - T[3-62] 9.4E-31 |
| Hamap |
Ribosomal_S15P (IPR023029) - T[5-147] 29.368 |
| SUPERFAMILY |
S15_NS1_RNA-bd (IPR009068) - T[68-144] 1.15E-20 |
| CDD |
Ribosomal_S15 (IPR000589) - T[72-147] 3.99695E-25 |
| SMART |
Ribosomal_S15 (IPR000589) - T[73-147] 3.3E-7 |
| Pfam |
Ribosomal_S15 (IPR000589) - T[77-144] 2.0E-14 |
| ProSitePatterns |
Ribosomal_S15 (IPR000589) - T[100-130] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS13_HUMAN | 90.345 % | 272 | 1.27E-95 |