- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1192.g14032.04.t
Possible name(s)
RPS13
Gene model
Location
S1192 [22,813 / 24,880]
Amino acid sequence
Length: 138
>Phmamm.CG.MTP2014.S1192.g14032.04.p
DIMGRMHAPGKGLSASALPYRRSVPTWLKLSSDDVKEQIFKLAKKGLRPSQIGVILRDSH
GVAQVRFVTGSQILRILKAKGLAPDLPEDLYHLIKKAVAMRKHLERNRKDTDSKFRLILV
ESRIHRLARYYKSKAVLP
Nucleotide sequence
Length: 416
>Phmamm.CG.MTP2014.S1192.g14032.04.t
AGACATCATGGGGCGAATGCACGCACCTGGAAAAGGCCTTTCGGCGTCGGCTTTACCATA
CCGTCGAAGTGTGCCAACATGGTTGAAGTTGAGCAGCGATGATGTTAAGGAGCAGATATT
CAAGTTGGCTAAGAAGGGTCTTCGTCCATCACAAATTGGTGTGATTCTTAGAGATTCCCA
TGGGGTTGCACAGGTTCGATTTGTCACTGGAAGTCAAATACTACGAATTCTTAAGGCCAA
GGGTCTTGCTCCTGATTTGCCAGAGGATTTATACCATCTTATCAAAAAAGCTGTAGCTAT
GCGTAAACACTTGGAAAGAAACCGAAAGGATACTGATTCCAAATTCCGTCTTATTCTCGT
GGAGAGCCGAATTCATCGTTTGGCTCGTTACTACAAGTCAAAGGCAGTTCTTCCAC
| Pfam |
Ribosomal_S13/S15_N (IPR012606) - T[3-62] 8.1E-31 |
| SMART |
Ribosomal_S13/S15_N (IPR012606) - T[3-62] 1.5E-37 |
| PANTHER |
Ribosomal_S15P (IPR023029) - T[3-138] 2.0E-73 |
| SUPERFAMILY |
S15_NS1_RNA-bd (IPR009068) - T[68-137] 2.12E-18 |
| CDD |
Ribosomal_S15 (IPR000589) - T[72-138] 2.06295E-21 |
| SMART |
Ribosomal_S15 (IPR000589) - T[73-138] 1.2E-5 |
| Pfam |
Ribosomal_S15 (IPR000589) - T[77-135] 5.3E-13 |
| ProSitePatterns |
Ribosomal_S15 (IPR000589) - T[100-130] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS13_HUMAN | 90.441 % | 253 | 1.93E-88 |