- Transcript 'Boleac.CG.SB_v3.S63....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S11.g00451.01.t
Possible name(s)
ABCC1; ABCC4; ABCC5
Gene model
Location
S11 [33,565 / 39,218]
Amino acid sequence
Length: 778
>Phmamm.CG.MTP2014.S11.g00451.01.p
MENTVLGVEKIAESQVSLRRIEEVGATSLNTLNNINLDLHNPGLVAVIGPVGSGKTSLLN
VILGELPVKFGQIRAKGTIVYVSQIPWVFSGTILENILFGEKYEMERYDQVINACALTED
LKALEHGSYTLVGERGVTLSGGQKARVNLARAAYRRNTNIILLDDPLSAVDAKVAKHIFE
KCICGIFGSKITLLVTHQLFCLRDVDNILILKEGEVLDMGTYETLYEEGIDFNNLIKRET
VPVRENHGAHHDQETNSASRRRTLSEIHFDADNFQAPIDIKENFEGATQSEEIKAHGSIG
WKSYFTYIANNKLSFLIWILIFSCSHVTYVLCDWWISLWVTESTLHFSSQTLVVNNKSLS
MSSTTSFPSSDVTDTHVTDDTAFSNSYYVYVLAYRSPVFSHLSSTLQGLATIRGFQIEDE
FEQEFHRLQDVHSRAWLTSVAGARWFAMRLDLLNAIFGGCTIFLFLLTTPVSEASVGQVG
LTIVYVLQMGSAFQWCVHVSTEVENQMTSFERIEQYSKIPPEAPHYIPNSQPPKTWPVNG
KITFENISFAHFDDGQLVLRDISAQIAANEKVGIVGRTGAGKSSLLSCLFRLNELSSGTI
YFDDVDISQIGLNALRSSISSIPQDPMLFAGTLRINLDPFSYYKDEEIWNALRKVEMEET
IGAFPSKLTMEVAERGSNFSVGQRQLLCLARAILKRNKILVIDEATANVDTRTDQLIQKS
ISETFQDCTVITVAHRINTIIDCDRVMVLAKGRIVEFDQPSKLLLNNDSEFSKMKQAL
Nucleotide sequence
Length: 2,337
>Phmamm.CG.MTP2014.S11.g00451.01.t
ATGGAAAATACCGTATTGGGAGTAGAAAAGATTGCTGAGTCACAAGTTAGCTTGAGGCGA
ATTGAGGAGGTTGGTGCTACATCGTTGAATACTCTGAACAACATCAATCTGGACTTACAC
AATCCTGGACTTGTAGCGGTCATTGGTCCAGTTGGCTCCGGAAAGACTTCTCTTCTAAAT
GTGATTCTTGGAGAGCTTCCAGTTAAATTTGGCCAAATTAGAGCAAAAGGGACTATTGTT
TACGTAAGTCAAATCCCTTGGGTATTTTCTGGAACAATATTGGAAAATATATTGTTTGGA
GAAAAATATGAGATGGAGCGTTACGATCAAGTCATCAATGCCTGTGCTCTAACAGAGGAT
TTGAAAGCATTGGAGCACGGAAGCTACACTTTGGTGGGTGAGAGGGGAGTTACTCTCAGT
GGGGGTCAAAAAGCCAGGGTCAATCTGGCACGGGCGGCCTATAGACGAAATACAAATATC
ATTCTGTTGGATGATCCCTTGAGTGCAGTTGACGCAAAAGTTGCAAAACACATTTTTGAG
AAGTGTATTTGTGGCATTTTTGGAAGCAAGATAACATTGTTGGTTACTCACCAGCTTTTC
TGTCTACGTGATGTTGACAACATTCTCATATTAAAGGAGGGTGAAGTTTTAGACATGGGA
ACTTATGAGACACTTTATGAGGAAGGAATCGACTTCAACAACTTGATAAAGCGTGAAACA
GTACCTGTCAGAGAAAACCATGGAGCTCATCATGACCAGGAGACAAATTCAGCTTCCCGT
CGCAGAACATTGTCTGAAATTCATTTTGATGCAGATAATTTTCAAGCCCCAATTGATATC
AAGGAAAACTTTGAGGGTGCAACACAAAGTGAAGAAATAAAAGCTCATGGAAGTATTGGT
TGGAAATCATACTTCACTTACATTGCAAACAACAAACTCAGCTTTTTAATTTGGATTTTG
ATATTTTCATGCAGTCATGTGACCTACGTGCTATGCGATTGGTGGATTTCATTATGGGTG
ACCGAATCTACATTGCATTTTTCATCCCAAACTTTGGTAGTAAACAACAAATCATTATCC
ATGAGTTCAACAACCTCGTTTCCATCATCAGATGTCACAGACACACATGTCACAGACGAC
ACGGCTTTCTCAAACAGTTATTATGTTTACGTGTTGGCTTATAGGAGTCCAGTGTTCTCG
CATCTTTCCTCCACCCTGCAGGGACTGGCCACGATTCGTGGATTTCAAATAGAGGACGAG
TTTGAACAAGAATTTCACCGATTGCAAGACGTTCACAGTCGAGCGTGGTTAACGTCTGTT
GCTGGAGCAAGGTGGTTTGCAATGAGACTTGATCTACTCAATGCAATATTTGGTGGTTGT
ACAATTTTTCTTTTTCTTCTGACAACTCCTGTATCGGAAGCTAGCGTGGGACAAGTTGGA
CTCACAATTGTTTATGTCTTGCAAATGGGATCGGCTTTTCAATGGTGTGTACACGTCAGC
ACAGAAGTTGAAAATCAGATGACGTCGTTTGAACGAATTGAGCAATATTCAAAAATTCCT
CCCGAGGCCCCACATTATATTCCCAACTCTCAGCCGCCAAAAACGTGGCCGGTGAACGGA
AAAATAACTTTCGAAAATATAAGTTTTGCACATTTTGATGATGGACAACTGGTGCTACGT
GACATATCAGCACAAATTGCTGCAAATGAAAAGGTTGGTATTGTCGGACGAACTGGAGCT
GGAAAAAGTTCTTTACTTTCCTGTTTGTTTCGACTGAATGAATTAAGCAGTGGAACAATA
TATTTTGATGACGTAGATATCTCCCAAATAGGACTAAATGCTCTGCGCTCATCTATATCT
TCTATTCCACAGGATCCCATGCTGTTCGCGGGAACTCTGAGAATCAATCTTGACCCATTT
TCGTATTACAAAGATGAAGAAATTTGGAATGCTCTCAGAAAGGTTGAAATGGAAGAAACC
ATTGGAGCTTTTCCATCCAAACTAACTATGGAGGTGGCTGAGCGCGGATCAAATTTTAGC
GTCGGTCAGCGACAACTTCTTTGTCTTGCTCGGGCTATTTTGAAAAGAAACAAAATTCTT
GTTATCGACGAAGCGACAGCTAACGTGGACACTAGAACCGATCAGTTGATCCAAAAGTCA
ATTAGCGAGACGTTTCAAGATTGCACAGTTATTACAGTGGCTCATCGAATCAACACAATT
ATTGATTGCGACCGTGTTATGGTGTTAGCGAAGGGACGAATAGTTGAATTTGACCAACCA
AGCAAACTTTTGTTGAACAACGACAGCGAGTTTAGCAAGATGAAGCAAGCGCTTTAA
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[16-238] 21.449 - T[542-776] 17.921 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[28-237] 8.52E-50 - T[531-768] 1.09E-71 |
| Pfam |
ABC_transporter-like (IPR003439) - T[32-167] 4.0E-17 - T[559-707] 2.4E-30 |
| SMART |
AAA+_ATPase (IPR003593) - T[41-223] 1.7E-8 - T[568-761] 2.9E-11 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[139-153] . - T[679-693] . |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[334-528] 8.63E-22 |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[382-524] 1.3E-14 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[391-491] 1.2E-7 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[393-505] 13.287 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MRP1_HUMAN | 46.494 % | 356 | 2.66E-106 |
| MRP5_HUMAN | 47.644 % | 357 | 5.26E-107 |
| MRP4_HUMAN | 54.167 % | 420 | 1.66E-130 |