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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA203YP07' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S11.g00453.01.t

Possible name(s)

CLEC10A; CLEC17A; COLEC12

Gene model

Phmamm.CG.MTP2014.S11.g00453

Location

S11 [70,832 / 72,007]

Sequences

Amino acid sequence

Length: 151

>Phmamm.CG.MTP2014.S11.g00453.01.p
MQLILLSCLTFVLWTLDYGWIPIFNGYEYLFERTGFNFNDSRKFCQSKGGDLATVGMRNN
VTRKYLMETLTPTKTPYSVWIGLTDQNQEGNWTWIDGVRGTITNTNFATGEPNNYGVGQD
CAYFHRFPGGYKMADYYCSSRFSALCERRMQ

Nucleotide sequence

Length: 456

>Phmamm.CG.MTP2014.S11.g00453.01.t
ATGCAATTAATACTTTTGTCATGTTTAACGTTCGTTTTATGGACTTTAGATTACGGATGG
ATTCCTATTTTCAACGGTTACGAATATTTGTTCGAACGAACTGGATTTAACTTCAATGAT
TCACGAAAGTTTTGCCAGAGCAAAGGAGGCGACCTGGCTACCGTTGGAATGAGAAACAAC
GTAACAAGGAAATACTTGATGGAGACATTGACTCCCACTAAAACTCCATACAGCGTTTGG
ATTGGACTTACCGACCAGAATCAAGAAGGAAACTGGACATGGATCGATGGAGTTCGCGGA
ACAATCACAAACACAAACTTCGCTACAGGGGAACCAAACAACTACGGAGTCGGACAGGAC
TGTGCGTATTTTCATCGTTTTCCTGGTGGCTACAAAATGGCAGATTATTACTGCAGCTCC
CGTTTTTCGGCTCTTTGCGAAAGAAGAATGCAGTAA

InterProScan

SUPERFAMILY
CTDL_fold (IPR016187) - T[7-150] 1.89E-31
Gene3D
C-type_lectin-like/link_sf (IPR016186) - T[12-151] 2.0E-29
SMART
C-type_lectin-like (IPR001304) - T[16-147] 1.3E-23
ProSiteProfiles
C-type_lectin-like (IPR001304) - T[24-147] 18.151
Pfam
C-type_lectin-like (IPR001304) - T[37-148] 2.1E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value