- Clone 'cima877374' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S120.g03637.01.t
Possible name(s)
FZD6; SFRP5; SMO
Gene model
Location
S120 [165,214 / 167,923]
Amino acid sequence
Length: 258
>Phmamm.CG.MTP2014.S120.g03637.01.p
MTTPSGITNISSTTLGLAKCEKLASLPCESLNSSASCFGTTIPNTATSFELAGDASTLVE
AQDRLLLWSGLRAVPRCWDVIQPLLCSVYYPTCENNKITLPDRSLCLETRSPCRIVELEH
GWPEFLECDNNDVFDDGCQINRLQFNKSDCELPLIATTNKASYYDGVEGCGLQCMNPLFN
QTQHDEIHAFIAGWASVACLCTFFAMNLISPTSRKHILPPKFLCDISAIVVEILGTYALF
VSCSVRRVIKIDDSAEGN
Nucleotide sequence
Length: 777
>Phmamm.CG.MTP2014.S120.g03637.01.t
ATGACCACCCCATCTGGGATTACTAACATCTCTTCTACCACTCTTGGATTGGCAAAATGT
GAAAAGCTAGCATCCTTACCATGTGAGAGCTTGAACAGTTCCGCATCTTGCTTTGGAACT
ACTATTCCTAATACAGCAACTTCGTTTGAACTTGCTGGTGATGCCAGTACGTTGGTTGAG
GCCCAGGATAGATTACTTCTTTGGTCAGGCTTAAGAGCTGTCCCAAGATGTTGGGATGTA
ATTCAGCCTCTCTTGTGTTCAGTCTACTATCCAACATGTGAAAACAACAAGATTACTTTG
CCTGACAGATCTTTATGCTTGGAGACCCGTAGTCCCTGTCGCATAGTTGAACTTGAACAT
GGATGGCCAGAATTTCTTGAATGTGACAACAATGATGTTTTTGATGATGGCTGTCAGATC
AACAGACTGCAGTTTAACAAATCTGATTGTGAGCTACCATTGATTGCGACCACCAACAAG
GCTTCATACTATGATGGAGTAGAGGGTTGTGGGCTGCAGTGTATGAATCCACTCTTTAAC
CAGACACAACATGATGAAATTCACGCATTTATAGCAGGCTGGGCATCTGTTGCCTGCCTG
TGCACCTTCTTTGCTATGAATTTAATATCACCCACATCAAGAAAACATATTTTGCCCCCA
AAGTTCCTTTGCGACATATCAGCTATTGTGGTTGAAATTCTTGGCACATATGCCCTCTTT
GTGTCATGCTCAGTCAGGCGTGTTATCAAGATTGATGACAGCGCAGAGGGAAATTAA
| Gene3D |
Frizzled_dom_sf (IPR036790) - T[10-138] 1.3E-36 |
| PANTHER |
SMO (IPR026544) - T[17-206] 6.2E-73 |
| PANTHER |
Frizzled/SFRP (IPR015526) - T[17-206] 6.2E-73 |
| SMART |
Frizzled_dom (IPR020067) - T[27-144] 3.0E-15 |
| SUPERFAMILY |
Frizzled_dom_sf (IPR036790) - T[28-139] 1.11E-19 |
| Pfam |
Frizzled_dom (IPR020067) - T[28-130] 5.9E-11 |
| ProSiteProfiles |
Frizzled_dom (IPR020067) - T[28-153] 14.493 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMO_HUMAN | 44.118 % | 207 | 8.34E-62 |