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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1216.g14114.01.t

Possible name(s)

NLRP3; NOD2; RANGAP1

Location

S1216 [68 / 2,793]

Sequences

Amino acid sequence

Length: 365

>Phmamm.CG.MTP2014.S1216.g14114.01.p
MDKIAKLAWNGFMKKQTVFRKVDLDNVGIDMKTFTDILSAFVTEENWGMKILDCDRKSNF
SHLIWQEYFAACYLVYFSSVDEFCKWIPQFASDRWEVVTKFVFGLFNSEVHEVAETFFWA
PNKNKEEFLAKKAKLLELACDEMKVREGRKKVMSSMKLVEVCSWLQEINNEEFYQVVVPF
LSVEINLSDYIHLTDVYSITEVLSHSKTKHDIKIPMLKLLSLCKNTVTDESAFAIASCIH
NIEELHLRDCDLTNVGICKIAEAISNLSQPIKFLDINNNKVTDESASAIASCIYNTEELD
LGRCQLTSVGIRKIAEAISKLSQPIKLHSISMNSMDEEANEFLRGVRHNIDVDELTVDML
VTKFT

Nucleotide sequence

Length: 1,098

>Phmamm.CG.MTP2014.S1216.g14114.01.t
ATGGATAAAATTGCCAAGTTGGCATGGAATGGATTTATGAAAAAACAAACTGTTTTTAGG
AAAGTAGATCTGGACAATGTAGGGATTGACATGAAAACATTTACTGACATACTTTCAGCT
TTTGTAACAGAAGAAAATTGGGGAATGAAAATTCTTGACTGTGACAGAAAAAGCAATTTT
TCACATTTAATTTGGCAAGAGTATTTTGCTGCTTGTTACCTTGTTTACTTCTCAAGTGTT
GATGAGTTTTGTAAATGGATTCCTCAGTTTGCAAGTGACAGATGGGAGGTAGTTACCAAG
TTTGTGTTTGGTCTTTTCAACTCCGAAGTACATGAAGTAGCTGAAACTTTTTTTTGGGCA
CCAAACAAAAACAAAGAAGAATTTCTGGCCAAGAAAGCAAAGTTATTGGAACTTGCTTGT
GATGAAATGAAAGTGAGAGAAGGGAGAAAGAAAGTAATGAGCAGCATGAAATTGGTGGAA
GTCTGCTCCTGGTTGCAAGAAATTAATAATGAAGAATTTTATCAAGTAGTTGTCCCATTT
CTGTCTGTGGAGATAAATTTAAGTGACTATATCCATTTGACTGATGTCTACAGCATTACA
GAAGTGCTGAGTCATTCTAAAACCAAACATGACATCAAGATTCCGATGCTTAAGTTATTG
AGCCTTTGCAAGAACACAGTCACTGATGAAAGTGCATTTGCAATAGCTTCCTGTATTCAT
AATATTGAGGAACTGCATCTCAGGGATTGTGATCTAACCAATGTTGGAATTTGTAAGATT
GCAGAAGCTATTTCCAACCTTTCACAACCAATTAAATTTTTGGACATTAATAATAACAAA
GTCACTGATGAAAGTGCATCTGCAATAGCTTCCTGTATTTATAATACTGAAGAATTGGAT
CTAGGACGTTGTCAACTGACAAGTGTTGGAATTCGTAAAATTGCAGAAGCTATTTCCAAA
CTTTCACAACCAATAAAGTTACATTCCATCAGTATGAACTCAATGGATGAGGAAGCAAAC
GAATTTTTGAGAGGTGTTCGACACAACATAGATGTGGATGAACTTACAGTGGATATGTTA
GTTACTAAATTTACATGA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[157-356] 2.1E-23
Pfam
Leu-rich_rpt (IPR001611) - T[240-260] 0.24 - T[271-290] 0.064 - T[297-315] 0.42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





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