- Transcript 'KH2012:KH.C3.101.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S44...' >
- Transcript 'Harore.CG.MTP2014.S8...' >
- Transcript 'KH2012:KH.C6.158.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1226.g14160.01.t
Possible name(s)
COL12A1; COL14A1; COL7A1
Gene model
Location
S1226 [35,058 / 43,393]
Amino acid sequence
Length: 239
>Phmamm.CG.MTP2014.S1226.g14160.01.p
MITCPPRPERPGNGSVHCSDGINLRSRCRYMCRPDYELIGASFTECKDVGRGDGTGIWTN
QTPYCKRNDFRVRSDSTHYSVIRYNKVVDEETQILFNDYTDSIDGILRAFDAIPYDGSGT
RTGNALNYTADVLLKVGNRPEAKDVVLLITDGASQDTVSMEAKKVRDSGALFFILPVKPP
VGRLDMTEISDMAGPGNNDKIIRDALERGFDALDEEFAKKMSQLLCGDPCSLNPLHGHE
Nucleotide sequence
Length: 720
>Phmamm.CG.MTP2014.S1226.g14160.01.t
ATGATCACGTGTCCACCTCGTCCCGAACGCCCTGGCAACGGATCTGTACACTGCTCTGAT
GGGATAAATCTCCGCAGCAGATGCAGGTACATGTGCCGTCCTGACTATGAACTAATCGGA
GCCTCCTTCACTGAATGCAAAGACGTGGGAAGAGGGGATGGGACTGGCATCTGGACGAAT
CAGACACCTTACTGCAAGCGTAATGACTTCAGAGTAAGGTCTGACTCTACGCATTACTCC
GTTATTCGCTACAATAAAGTCGTGGACGAAGAAACGCAGATTTTGTTTAATGACTACACT
GACAGCATTGACGGAATTCTGAGAGCTTTCGACGCAATTCCTTATGATGGAAGCGGTACA
AGAACTGGAAATGCGTTGAACTATACAGCTGATGTCTTACTGAAAGTCGGTAACAGACCT
GAAGCAAAAGATGTCGTCCTGCTGATTACTGATGGAGCTTCCCAAGATACAGTTTCAATG
GAAGCTAAGAAAGTCAGGGATTCTGGGGCCCTGTTCTTTATACTTCCTGTAAAACCCCCG
GTGGGTCGACTGGACATGACTGAAATTTCGGACATGGCCGGACCAGGAAACAATGACAAA
ATTATCCGGGACGCTTTGGAACGTGGTTTCGACGCTTTGGACGAGGAGTTTGCAAAGAAG
ATGAGTCAACTGCTTTGCGGTGACCCTTGCTCTTTGAACCCGCTTCACGGTCACGAGTAA
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[2-67] 9.639 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[3-67] 9.73E-11 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[4-66] 1.47212E-9 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[4-65] 4.7E-5 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[6-65] 5.9E-5 |
| SMART |
VWF_A (IPR002035) - T[46-210] 0.0021 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[68-231] 9.3E-23 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[68-221] 14.391 |
| Pfam |
VWF_A (IPR002035) - T[69-199] 7.0E-16 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[69-229] 9.94E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|