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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S122.g03672.02.t

Possible name(s)

GPD1; GPD1L

Location

S122 [140,858 / 143,987]

Sequences

Amino acid sequence

Length: 319

>Phmamm.CG.MTP2014.S122.g03672.02.p
MGKKVCIIGSGNWGSAIAKIVGDQCAASDEFHTDVHMYVYEEMIKGEKLTEIINTRHENV
KYLPGHKLPQNVIAVPDLVEAGKNADIMIFVVPHQFIRGFCEKLKDHVKPDAIGISLIKG
MDHTKEGLQLISDVIKNILSIDVSVLMGANIASEVADEKFCETTIGCTVDANGQIFKRLL
QTPNFRICVVNDSKTVEICGALKNIVACGAGFVCGLGYGDNTVSAVIRLGLMEMMKFAKA
FFPDNPPQTATFLESCGVADLVTTCYGGRNRRVSQAFVTSKKTIEQLEEEMLGGQKLQGP
QTAQEVYKVMQTLKINEDE

Nucleotide sequence

Length: 1,294

>Phmamm.CG.MTP2014.S122.g03672.02.t
TAAAAAATGGGTAAAAAAGTATGCATCATTGGATCTGGAAACTGGGGCTCTGCCATAGCA
AAAATTGTTGGTGACCAGTGTGCTGCATCAGATGAATTTCACACTGATGTCCACATGTAT
GTGTACGAAGAAATGATAAAAGGAGAAAAGCTTACAGAAATTATCAACACAAGACATGAA
AATGTTAAATATTTGCCAGGCCACAAGCTTCCACAAAATGTTATTGCTGTCCCAGATTTG
GTTGAGGCTGGAAAAAATGCAGATATTATGATATTTGTTGTTCCTCACCAATTTATCAGA
GGATTTTGTGAAAAACTAAAAGATCATGTTAAACCTGATGCAATTGGAATATCCTTAATC
AAAGGTATGGATCATACAAAGGAAGGTCTTCAACTTATCAGTGATGTTATCAAAAATATA
TTATCAATTGATGTTAGTGTGTTGATGGGTGCCAACATTGCGTCAGAAGTTGCCGATGAA
AAGTTTTGTGAAACTACCATTGGTTGCACTGTTGATGCCAATGGCCAAATTTTTAAACGC
CTTCTGCAAACTCCAAACTTTCGTATTTGTGTTGTCAATGACTCAAAAACAGTTGAAATT
TGTGGTGCTCTGAAAAACATTGTAGCTTGTGGTGCTGGATTTGTCTGTGGATTGGGATAT
GGAGACAACACTGTTTCCGCTGTTATAAGACTGGGGCTCATGGAAATGATGAAGTTCGCC
AAGGCATTCTTTCCTGACAATCCACCGCAGACTGCCACATTTCTTGAAAGTTGTGGGGTA
GCTGATCTTGTAACTACTTGCTATGGTGGCAGAAATCGAAGAGTATCTCAAGCATTTGTG
ACCAGCAAAAAGACCATTGAACAACTTGAAGAGGAAATGTTAGGAGGACAAAAGTTACAA
GGTCCTCAAACTGCACAAGAAGTTTATAAAGTGATGCAAACTTTAAAAATAAATGAGGAT
GAGTAAGTATCATTCATTTACCAATTTTAACTGTGCAAATTTTCCGACTCAAAATAATAT
TAAAATGAAAATTTGTCTGCAGGTATCCACTGTTTGTATCAGTCTACAATATTTTTTTCA
ACAACACTCCAGTGAAGAACTTTATTGAATGTCTTCAAAAACATCCAGAGCACATGTAAT
TTTATGATGCTTAAAGTCTGTGTGGCAATTTCACAAAATTTAGAGTATGCAACAAAATAT
TTTTCTGATGTTTTTTTTCCTTTTGTGCCCTCAAAATGAATTTATTGATTGTTAGTTTTG
TTATTTAATTTTGAAAAAGATAGTAAATAAAAAG

InterProScan

PIRSF
G3P_DH_NAD-dep (IPR006168) - T[1-318] 9.3E-87
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[3-192] 3.01E-41
TIGRFAM
G3P_DH_NAD-dep_euk (IPR017751) - T[4-316] 1.5E-138
Pfam
G3P_DH_NAD-dep_N (IPR011128) - T[4-169] 7.0E-54
PRINTS
G3P_DH_NAD-dep (IPR006168) - T[7-24] 7.5E-78 - T[69-96] 7.5E-78 - T[145-165] 7.5E-78 - T[185-209] 7.5E-78 - T[210-234] 7.5E-78 - T[254-271] 7.5E-78
SUPERFAMILY
6-PGluconate_DH-like_C_sf (IPR008927) - T[191-315] 4.59E-36
Pfam
G3P_DH_NAD-dep_C (IPR006109) - T[192-315] 4.9E-38
Gene3D
6PGD_dom2 (IPR013328) - T[193-318] 7.3E-52
ProSitePatterns
G3P_DH_NAD-dep (IPR006168) - T[200-221] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GPD1L_HUMAN 63.961 % 410 3.29E-144
GPDA_HUMAN 68.608 % 431 1.14E-152