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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S126.g03753.01.t

Possible name(s)

RDH12; RDH13; RDH14

Gene model

Phmamm.CG.MTP2014.S126.g03753

Location

S126 [82,153 / 84,190]

Sequences

Amino acid sequence

Length: 227

>Phmamm.CG.MTP2014.S126.g03753.01.p
MANPVSADGSWVRSGVKLTGKTVIITGANTGIGLFTAINLAERQAKVILACRNYEKAELA
KQKILAEAKCPEENVVIKSLDLSSFASIRKFAEDINTTEEQLDILINNAGVMMCPEGKTE
DGFEIQFGVNHLGHFLLTNLLLDLIKKSAPSRIVNVASAFHKYGTINFDDLNSNNGYSPI
KAYGQSKLCNILFSRFLAKTLEVTATLQQKARTQETTMTQKDYGILA

Nucleotide sequence

Length: 684

>Phmamm.CG.MTP2014.S126.g03753.01.t
ATGGCTAATCCTGTAAGTGCAGATGGAAGCTGGGTCCGTTCTGGGGTAAAATTGACGGGG
AAAACCGTGATTATCACTGGAGCAAATACTGGAATTGGTTTGTTTACAGCCATTAACTTG
GCAGAACGCCAAGCCAAAGTTATCCTTGCTTGTCGAAATTATGAAAAGGCAGAACTTGCC
AAACAAAAGATACTAGCTGAAGCAAAGTGCCCAGAGGAAAATGTGGTTATTAAAAGTCTT
GATCTTTCTTCTTTTGCATCAATCAGAAAGTTTGCTGAAGACATAAATACCACAGAGGAG
CAACTTGACATACTCATAAATAATGCTGGAGTTATGATGTGCCCTGAAGGTAAAACCGAG
GATGGGTTTGAGATTCAATTTGGTGTCAATCATCTTGGACACTTTTTACTCACAAACTTG
CTTCTTGACCTCATAAAGAAAAGTGCTCCAAGCCGTATTGTAAATGTTGCTTCAGCATTC
CATAAATATGGTACAATTAATTTTGATGATTTGAACAGTAACAATGGTTATTCACCCATA
AAAGCTTATGGACAAAGCAAGTTGTGTAACATCTTGTTTTCCCGCTTTCTAGCCAAAACC
TTGGAAGTGACTGCCACATTACAACAGAAAGCGAGGACGCAAGAAACGACCATGACGCAG
AAAGATTATGGAATATTAGCATGA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[18-201] 5.86E-47
Pfam
SDR_fam (IPR002347) - T[21-166] 1.7E-25
PRINTS
SDR_fam (IPR002347) - T[22-39] 2.2E-11 - T[100-111] 9.6E-7 - T[100-111] 2.2E-11 - T[145-161] 2.2E-11 - T[151-159] 9.6E-7 - T[183-202] 9.6E-7 - T[183-202] 2.2E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH13_HUMAN 56.316 % 184 2.37E-57
RDH14_HUMAN 53.535 % 187 1.29E-58
RDH12_HUMAN 55.33 % 187 1.1E-58