Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S126.g03769.01.t

Possible name(s)

Phmamm.CG.MTP2014.S126.g03769

Gene model

Phmamm.CG.MTP2014.S126.g03769

Location

S126 [200,750 / 203,758]

Sequences

Amino acid sequence

Length: 301

>Phmamm.CG.MTP2014.S126.g03769.01.p
MNIARIEAQTSLKKQKFAIFGSQLVWIVTYLILVTMTQVGFSTTVKGQISPFVGARGAEK
PEGMISNDNCFNLVKKCHKDKQCREAFRQLNTKCAVKAGSCNAAMMDLPICAEIMDTLTA
RIFNLKQKCTCQRSSVRCETIHSRVYDNPCFANINFLRQRNLIPKFEDAPKKAKTTTPLT
ETARTVDLLETLLTTYEDYPSEETEHVTTTSPKSTTTFIAKSEEKRMFAVNDITSSRLLE
EIEMTDTMDRKHPTYSSSHDDGVLLHVVAIATGVLVFLTLAVGTSLVVYFGLRRRPTDEK
H

Nucleotide sequence

Length: 995

>Phmamm.CG.MTP2014.S126.g03769.01.t
GTTCTGTGTTCATCTGCTGGATCTGTGACGCAACAATAGGCACTGTGAGCCACTATTGTC
CCTTTAATCCCTGTTAAGTATATCTGCAAACATGAATATCGCTCGAATTGAAGCTCAAAC
GTCTCTGAAGAAACAAAAATTCGCAATTTTTGGGTCACAACTAGTATGGATTGTGACGTA
CCTAATTCTGGTGACGATGACGCAAGTTGGTTTTTCAACGACAGTCAAAGGTCAAATCTC
ACCGTTTGTCGGCGCTAGAGGTGCAGAAAAACCGGAAGGAATGATTAGCAACGATAACTG
CTTCAATTTGGTAAAGAAATGCCACAAGGATAAGCAATGTCGAGAAGCCTTCAGACAGCT
TAACACCAAATGTGCAGTCAAAGCTGGAAGTTGCAACGCTGCAATGATGGATTTGCCAAT
CTGTGCAGAAATAATGGACACCCTAACCGCCCGAATCTTTAACCTCAAGCAGAAGTGCAC
ATGTCAAAGGAGCTCTGTTCGATGCGAAACCATCCATTCTCGAGTTTACGACAATCCATG
TTTCGCAAATATTAACTTCTTGCGACAAAGAAACCTCATTCCCAAATTTGAGGACGCACC
TAAGAAAGCGAAAACCACAACACCTTTGACCGAAACAGCACGTACAGTTGACCTCCTTGA
AACACTTCTGACGACGTATGAGGATTACCCGTCTGAAGAAACCGAACACGTCACTACGAC
GTCACCTAAATCCACGACCACGTTTATTGCGAAATCCGAAGAGAAAAGAATGTTTGCCGT
GAATGATATTACGTCATCGCGTCTTTTAGAGGAGATTGAAATGACAGACACGATGGATAG
AAAACATCCAACATACAGTTCTTCTCATGACGATGGTGTATTGTTACATGTCGTCGCCAT
AGCAACCGGGGTATTGGTATTTTTGACGCTTGCCGTTGGAACTTCGCTTGTGGTTTATTT
CGGCTTACGGCGACGACCCACGGACGAAAAGCATC

InterProScan

SUPERFAMILY	GDNF_alpha (IPR037193) - T[68-153] 5.62E-7
SMART	GDNF/GAS1 (IPR016017) - T[70-150] 8.1E-5
Pfam	GDNF/GAS1 (IPR016017) - T[70-150] 9.0E-7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value