- Transcript 'KH2012:KH.C9.358.v1....' >
- Transcript 'KH2012:KH.C9.358.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S127.g03772.01.t
Possible name(s)
FBN1; NELL2; UMOD
Gene model
Location
S127 [17,933 / 23,318]
Amino acid sequence
Length: 356
>Phmamm.CG.MTP2014.S127.g03772.01.p
MKTLLVLCSLVSVSMGFIFGGGGFPTLPGFSNPVCTVTGYEWTKFYDRDDPSVTGDHELR
SLMRNPNVCAKPVSIDARVVGTNKDFRTTNEKVEILASLGLKCLKKNNNNKCSDYKVRFC
CDVNECTEVSGFCGNGASCTNTPGGASCSCPAGTTGNPKVECTAIDVDECATDTDNCHAQ
ATCQNTIGSFTCTCKSGYTGDGTQCTRITCPKPTPPENGKIIFGKSSYKPGDSLIFKCND
HYVHDYAKHGFPRYKCGNNGEWSGSKLVCEGSCRYACSSHSIHLLRGSPPCGCDPSCKEN
GTCCADYTQNCVYPNPVPTFSFPPKPTFTFPPRPTISYPFPTGSFTFPPFTPPGKK
Nucleotide sequence
Length: 1,071
>Phmamm.CG.MTP2014.S127.g03772.01.t
ATGAAGACTTTACTGGTTTTGTGTTCTCTCGTCTCCGTCTCAATGGGCTTCATTTTTGGT
GGAGGAGGTTTTCCAACTTTGCCTGGTTTTTCAAACCCAGTTTGCACCGTAACCGGATAC
GAATGGACCAAGTTTTACGACCGGGACGACCCCTCCGTCACTGGCGATCACGAACTTCGG
TCTCTGATGCGAAATCCTAATGTTTGTGCGAAACCAGTTTCTATCGACGCCCGGGTTGTA
GGAACGAACAAAGACTTCCGAACAACGAATGAAAAAGTCGAAATTTTAGCAAGTTTGGGT
CTAAAATGTTTGAAGAAAAACAACAACAATAAATGTTCGGACTATAAAGTGCGATTCTGC
TGTGACGTCAACGAATGCACTGAAGTTTCTGGCTTTTGTGGAAACGGGGCTTCATGCACA
AACACACCTGGAGGAGCGAGCTGTAGTTGTCCGGCTGGTACCACAGGAAATCCAAAAGTT
GAATGCACAGCTATTGATGTTGACGAATGTGCCACTGATACTGACAACTGTCATGCACAG
GCAACCTGCCAAAACACCATAGGAAGTTTTACTTGTACTTGTAAATCTGGATACACCGGT
GATGGAACCCAATGCACCAGAATCACATGTCCCAAGCCCACACCTCCAGAAAATGGCAAA
ATTATATTCGGCAAGAGCTCATACAAACCTGGTGACAGTTTGATATTCAAATGCAATGAT
CATTATGTTCATGACTATGCAAAGCATGGATTCCCAAGGTATAAATGTGGAAACAATGGA
GAATGGAGTGGCAGCAAACTTGTTTGTGAAGGTAGCTGTAGGTATGCATGCTCCTCACAC
AGTATCCATTTGCTGAGAGGATCGCCTCCTTGTGGCTGTGATCCCTCGTGCAAAGAAAAT
GGAACCTGCTGTGCAGATTATACACAAAACTGTGTGTACCCAAATCCAGTTCCAACGTTT
TCATTTCCCCCAAAACCAACGTTTACATTTCCACCCAGACCAACGATTTCCTATCCATTT
CCGACTGGATCTTTTACCTTCCCACCATTCACGCCTCCGGGGAAAAAATAA
| Pfam |
WxxW_domain (IPR025155) - T[42-121] 1.3E-15 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[122-163] 15.499 - T[166-206] 18.121 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[122-162] 3.0E-5 - T[166-205] 2.4E-12 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[122-163] 2.7E-8 - T[166-206] 2.0E-11 |
| SMART |
EGF-like_dom (IPR000742) - T[125-163] 0.032 - T[169-206] 5.4E-5 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[166-192] . |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[183-194] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[192-205] . |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[208-273] 1.67E-11 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[208-271] 9.784 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[210-269] 2.9E-9 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[210-269] 1.2E-9 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[210-270] 1.02858E-9 |
| Pfam |
Somatomedin_B_dom (IPR001212) - T[269-312] 1.5E-5 |
| ProSiteProfiles |
Somatomedin_B_dom (IPR001212) - T[269-315] 7.608 |
| SUPERFAMILY |
Somatomedin_B-like_dom_sf (IPR036024) - T[272-315] 5.75E-6 |
| ProSitePatterns |
Somatomedin_B_dom (IPR001212) - T[291-311] . |
| Protein Name | Identity | Bit Score | e-value |
|---|