- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boleac.CG.SB_v3.S338...' >
- Molecular Tool 'En>Delta2' >
- Molecular Tool 'cieg40m20-MO' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S127.g03784.01.t
Possible name(s)
DKC1; TRUB1
Gene model
Location
S127 [112,264 / 115,884]
Amino acid sequence
Length: 372
>Phmamm.CG.MTP2014.S127.g03784.01.p
MFLLQAIETLTGALFQRPPLISAVKRQLRIRTIYESKLLEFDAERHLGVFWVKCEAGTYI
RTLCVHIGLLLGVGGQMQELRRVRSGIVSEEDNMVTMHDVLDAQYQYDHHKDETYLRRVI
SPLEKLLLNHKRIILKDSAVNAICYGAKILLPGVLRYEDGIELNQEIVVITTKGEAICLA
IALMTTAVISTCDHGIVAKIKRVIMERDTYPKKWGLGPKATLKKNMIKQGLLGKFGKPNE
KTPQAYIQGNPDFSLADVGNIVKTEAAQKDIESSSPAAKKRKRDDSETSTPKIEVIDSET
PLPEVKKEKKKKKKEKKDKKADTTMDTSAADTTAVTDQSGLASPDKKLKKDKKLKKEKKE
KKKKKKEDSDED
Nucleotide sequence
Length: 1,119
>Phmamm.CG.MTP2014.S127.g03784.01.t
ATGTTTCTGCTGCAGGCTATCGAAACGCTCACTGGTGCCTTATTCCAAAGGCCACCATTA
ATATCTGCTGTAAAACGACAGCTCCGTATTCGAACAATTTATGAAAGCAAGTTGCTTGAA
TTTGATGCTGAAAGGCATTTGGGTGTATTTTGGGTGAAGTGTGAAGCAGGAACTTACATT
CGAACTTTATGCGTCCACATTGGGTTATTGTTGGGTGTCGGAGGACAAATGCAAGAACTA
AGAAGAGTTCGATCAGGAATTGTTTCAGAAGAGGACAACATGGTGACAATGCACGATGTC
CTGGATGCACAATACCAGTACGACCACCACAAAGATGAAACCTACCTCCGACGAGTTATC
AGTCCACTTGAAAAACTTCTCCTTAATCACAAACGCATCATCCTAAAGGACAGTGCGGTA
AATGCAATTTGTTATGGAGCCAAAATCCTTCTTCCTGGGGTTTTAAGGTACGAAGATGGA
ATCGAGTTAAACCAAGAAATCGTTGTCATCACCACAAAGGGAGAAGCAATCTGTTTGGCC
ATTGCACTAATGACCACTGCCGTGATTTCTACTTGTGATCATGGGATTGTTGCCAAAATC
AAAAGGGTCATCATGGAAAGGGACACTTACCCCAAAAAGTGGGGTTTAGGACCCAAGGCA
ACATTAAAAAAGAACATGATAAAACAAGGGTTGTTAGGAAAATTTGGAAAACCAAACGAA
AAAACGCCACAGGCTTACATACAAGGCAATCCTGACTTCAGCTTGGCAGACGTTGGGAAC
ATTGTCAAAACTGAGGCTGCACAAAAAGACATTGAATCTTCAAGTCCGGCTGCAAAAAAG
AGAAAGAGAGATGACTCAGAAACGTCAACTCCGAAAATAGAAGTTATAGACAGTGAAACA
CCCCTTCCAGAAGTAAAGAAGGAAAAGAAAAAGAAGAAAAAAGAGAAAAAGGACAAAAAA
GCAGATACAACAATGGATACAAGTGCAGCTGATACGACCGCTGTTACTGACCAAAGTGGT
TTAGCGTCACCTGACAAAAAATTGAAAAAAGACAAGAAACTAAAGAAAGAAAAAAAGGAA
AAAAAGAAAAAAAAGAAGGAAGATTCTGATGAGGACTGA
| TIGRFAM |
tRNA_PsdUridine_synth_B_fam (IPR004802) - T[4-215] 4.2E-104 |
| PANTHER |
tRNA_PsdUridine_synth_B_fam (IPR004802) - T[4-364] 1.3E-155 |
| SUPERFAMILY |
PsdUridine_synth_cat_dom_sf (IPR020103) - T[4-128] 6.33E-35 |
| Pfam |
TruB_C (IPR032819) - T[61-127] 9.1E-22 |
| TIGRFAM |
Uncharacterised_CHP00451 (IPR004521) - T[120-200] 9.0E-8 |
| Gene3D |
PUA_sf (IPR036974) - T[127-242] 9.3E-55 |
| SUPERFAMILY |
PUA-like_sf (IPR015947) - T[130-211] 1.66E-20 |
| ProSiteProfiles |
PUA (IPR002478) - T[130-205] 17.618 |
| Pfam |
PUA (IPR002478) - T[131-204] 7.0E-18 |
| SMART |
PUA (IPR002478) - T[131-205] 1.5E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DKC1_HUMAN | 73.379 % | 429 | 2.36E-148 |