- Transcript 'Cisavi.CG.ENS81.R88....' >
- Clone 'cima002i23' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S128.g03820.01.t
Possible name(s)
FOXN1; FOXR1
Gene model
Location
S128 [155,974 / 160,941]
Amino acid sequence
Length: 588
>Phmamm.CG.MTP2014.S128.g03820.01.p
VIMVLYTKTKLSSPMVSISRSGKVMSLEKWKTDWFHEISELFHVTTDQVAAQTNTCKPTF
EKVRAIESKARLNTVLSLIERYIRGQLLVTSSSTKRKPIALNANNSNNRCARANWDHLDE
LKTSGVMPWTMVDPNEVCPVDHTYQARSPEICKSSYNLEEAVELLSGDYAMDDAASSTDL
ESSEDSSSLPSSDEKDAVASPPQRPKLLLMVNGTAPLSRKRKRTSEKEDDAQQENTPVQS
SSVVSLKNSGKLTHLLIPVSRSQLGNESKLTHARQGLSKVLQGQSQKLPPANVLLKRIEI
PASSIQRQKLLKGKVEDVKVEPSLSSLVTKPSDFTNEIFPNGALSELTDNTIGDDMFSFL
ENEESPLTSADLRMTSAEMQMQSLSSLFSQARPTKLTDIQNKMNTINSQHLQFNVPPVKP
KRKYTKHQKKADGSENQTVENEFSKPPLPYNQLIYLVFKQNNFCQLTVRNIYKCIRLWFP
YYEHAHQTWQNAVRHQLCCCKDYEKITLSPDSVADKGGKCAWKIRDQVSLKKLDEDLLAH
LDKNDVIFGIRNSMLDCDVFDSIFGDILNRHKNRKTVEQRIDEAILDM
Nucleotide sequence
Length: 1,778
>Phmamm.CG.MTP2014.S128.g03820.01.t
GTCATAATGGTGCTATACACGAAAACGAAGCTGTCCTCTCCAATGGTGTCAATATCACGT
AGCGGGAAAGTGATGTCACTTGAGAAATGGAAAACCGATTGGTTTCATGAGATAAGCGAA
TTATTTCATGTGACCACGGACCAGGTGGCCGCTCAAACAAACACCTGCAAGCCAACGTTT
GAAAAAGTGAGAGCGATTGAGAGCAAAGCGAGGTTGAACACAGTTTTGTCGTTAATCGAA
AGATATATTCGAGGCCAACTGCTCGTAACCTCATCTTCGACCAAGCGAAAACCAATTGCA
TTGAATGCCAACAACTCCAACAACCGTTGCGCAAGAGCTAATTGGGATCACTTGGATGAA
TTGAAAACATCAGGAGTAATGCCATGGACAATGGTCGACCCCAACGAGGTTTGTCCTGTG
GATCACACGTACCAAGCACGCAGTCCTGAAATATGCAAGTCATCGTACAACTTGGAGGAA
GCTGTCGAACTGCTGTCAGGCGACTATGCTATGGACGATGCCGCTTCATCTACCGACCTG
GAATCGTCTGAAGACAGCTCTTCATTACCATCTAGCGACGAGAAAGATGCCGTTGCGAGT
CCTCCTCAGCGACCGAAATTGCTGTTGATGGTAAACGGAACCGCACCGCTGTCGCGAAAA
CGAAAGAGAACTTCGGAAAAAGAAGATGACGCCCAACAGGAAAACACACCGGTTCAATCG
AGTTCGGTAGTAAGCTTAAAGAATTCCGGAAAACTGACTCACTTATTGATTCCAGTATCA
CGTAGCCAGTTGGGAAATGAGAGTAAACTTACTCACGCCCGTCAGGGTCTCTCCAAGGTT
TTGCAGGGACAAAGTCAGAAATTACCTCCGGCTAACGTTTTGCTGAAAAGAATCGAGATT
CCTGCTTCCTCTATCCAGCGGCAAAAGCTACTTAAAGGCAAAGTTGAAGATGTGAAAGTT
GAACCATCACTTTCCAGCCTTGTAACCAAACCATCGGATTTCACCAACGAAATTTTCCCA
AACGGTGCATTGAGTGAACTGACGGATAACACGATTGGTGATGACATGTTTTCTTTCTTG
GAGAATGAGGAGTCACCTTTAACCTCGGCCGATTTGCGGATGACTTCAGCTGAAATGCAA
ATGCAATCTTTATCGTCCTTATTTTCGCAAGCGCGGCCCACCAAGTTGACGGACATTCAA
AACAAGATGAACACTATAAACAGTCAACATCTTCAATTCAACGTACCACCAGTAAAACCG
AAACGTAAATACACAAAGCACCAGAAGAAAGCTGATGGCTCGGAAAATCAAACTGTCGAA
AATGAGTTTTCCAAGCCACCTCTTCCCTATAACCAACTCATCTACCTCGTTTTCAAACAA
AATAATTTTTGTCAACTGACGGTTCGAAATATATACAAGTGTATTCGTTTGTGGTTTCCC
TACTACGAACATGCTCATCAAACGTGGCAGAACGCTGTCCGACACCAACTGTGCTGCTGC
AAAGATTACGAAAAAATTACGCTGTCGCCCGACTCAGTGGCCGACAAAGGAGGAAAGTGC
GCGTGGAAAATTCGAGATCAAGTTTCACTAAAAAAGCTGGACGAGGATTTGTTGGCGCAC
CTTGATAAGAATGACGTCATATTCGGAATTCGAAACAGCATGCTTGACTGCGATGTTTTT
GATTCTATTTTTGGGGATATCCTGAACCGCCACAAAAACCGAAAAACAGTTGAACAGCGA
ATTGACGAAGCAATACTCGACATGTAACTTAACATATT
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[431-539] 2.5E-18 |
| SMART |
Fork_head_dom (IPR001766) - T[443-537] 1.7E-10 |
| Pfam |
Fork_head_dom (IPR001766) - T[444-527] 2.9E-18 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[444-529] 3.67E-18 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[445-543] 16.872 |
| PRINTS |
Fork_head_dom (IPR001766) - T[445-458] 3.1E-7 - T[466-483] 3.1E-7 - T[489-506] 3.1E-7 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[489-495] . |
| Protein Name | Identity | Bit Score | e-value |
|---|