- Transcript 'KH2012:KH.C6.158.v1....' >
- Transcript 'KH2012:KH.L40.23.v1....' >
- Transcript 'KH2012:KH.C3.798.v1....' >
- Transcript 'KH2012:KH.C1.755.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S12.g00492.02.t
Possible name(s)
CHD2; CHD3; CHD5
Gene model
Location
S12 [36,929 / 54,643]
>Phmamm.CG.MTP2014.S12.g00492.02.p
MEDGGNASQMFEHWQDDNVDDYTDDEVEESLVEKSKKKPKKKDRSKKSKKRKRNDESDTE
LLGISDGNSDAEVEAAMALFEQEDQLDTDEKPKKKRKKEKKKRMSPDVENSPVSVQSTKP
DTKEVKSSAELIQEWNLEPFEYEYTDEDYQNFTSYKLFSQSMKPKLTNRYPRLPATKTLT
IVASLWREFSYSMNVAKLPDDASQTNESSGPSLRQQVLRGPTASVNLLPLAEGKRSRSST
PKATNKKEKRVAPLRIRLPKKKKKGASSEDELSSDNDSDLEFEQTLAAAAQAASDSSSSR
PSSRRSNPRNNKGKKKPPIKKKKLLKANPQDEDGYETDHQDYCDVCKQGGEIILCDGCPR
AFHLVCLEPPLDKPPEGSWPCPVCVKNGVKPKDRSEYRDDDFMLDDEEEEDEENMDDHME
FCSVCKDGGDLLICDTCPHSYHLNCLNPPVAVVPEGEWSCPRCSCPMLKGKLQRVLAWRW
REAPYTEVPDERAGQEGKKKKLWGYKQREFLVKYAEYSFWDVDWITELQMEIYCPHQWRM
YLRRNDMEEPTPLDEDDDWTDKNLIEKYYRYGVQPEWLNIHRILNSRKVGRGPQVQYLVK
WKQLPYDKATWEPEDKDIPGMKEEIQKYKDHRQLMEGGREKSKKKKRKDDRSKPKNDPSE
KYDAQPNFITDLGLSLHEYQLEGLNWLRFSWSQHTDTILADEMGLGKTIQTIVFVKSLVV
ENHTKGPFLISVPLSTMINWEREFDLWAPELYVVSYYGDRDARSVIRENEFSFDDGAIRS
SKMAYRMKSGCQVKFHVLLTSYEMCTIDATTLASVDWAMVCIDEAHRLKNNQSKFFKVLS
DYNVGHKLLLTGTPLQNNLEELFHLLNFLCPAKFTDMNGFLDEFAEIAKEDQVKKLHELL
GPHMLRRLKADVLKGLVAKSEFIVRVNLTPMQRKFYRYILARNFDGLNSRGGPNNSSLLN
IMMDLKKCCNHPYLFNKAAEEAPRSANGAFDGTEMTKNGGKLIVLQKMMRKLKDRGNRVL
IFSQMTRMLDILEDFLEYEGYRYERIDGTITGLVRQEAIDRFNAPNSDHFAFLLSTRAGG
LGINLATADTVFIYDSDWNPHNDIQAFSRAHRIGQTNKVMIYRFVTKNSVEERVAEVAKR
KMMLTHLVVRPGMGSSKTTSMTKQELDDILRFGTEALFKDDDDAEGSNDFIHYDDRAIEA
LLDRSKEGVEAKEKENSQMNEYLSSFKVATYQYTDTHVEPEPEREIIQETMEQPDPNYWE
RLLRHHYEQQQEEIASTLGKGKRVRKQVNYYHAETATEVDRAAGGWDDNGSDYSGLSDTV
EDDDEEFDNTEGRKRGRRDKDRPLPPMLARVGGNIEVLGFTSRQRRTYLNFVMRYGMPPT
ENFQSRWLVRELRGKSEKEFRAYTSLFMRHLCEPGPDNADTYSDGVPREGVSRQHVLTRI
GVMSLIHKKV
>Phmamm.CG.MTP2014.S12.g00492.02.t
ATGGCGCCCATTGACGTGGAACGTAGAGAATAACTGATCGTCATTTTAATCAGCAAACGC
AAAGGCGCTTAACTACAGTTTGTATTACGACCGCGGATAGTCATGGAGGACGGAGGAAAC
GCAAGTCAAATGTTCGAACATTGGCAAGACGATAATGTAGATGATTATACAGATGATGAA
GTGGAAGAAAGCTTAGTTGAAAAATCAAAAAAGAAACCTAAAAAGAAAGACAGAAGCAAG
AAATCAAAGAAGCGTAAAAGAAACGATGAAAGTGATACCGAGTTGCTTGGAATATCAGAT
GGTAACAGTGATGCAGAAGTTGAAGCCGCAATGGCTCTGTTCGAGCAAGAAGATCAACTT
GATACTGATGAAAAGCCAAAGAAGAAACGCAAGAAGGAGAAAAAGAAACGAATGTCACCT
GATGTTGAAAATTCACCTGTTTCAGTACAAAGCACCAAACCTGACACAAAAGAAGTGAAA
TCATCTGCAGAACTGATCCAGGAATGGAACTTAGAACCATTTGAATATGAATATACTGAT
GAAGACTACCAGAATTTTACCAGCTACAAACTCTTCAGTCAAAGCATGAAGCCGAAACTA
ACTAATCGATACCCAAGGCTGCCAGCCACAAAAACACTGACAATTGTAGCTTCGCTTTGG
CGAGAGTTTTCATACTCAATGAATGTGGCAAAATTGCCAGATGATGCTAGTCAAACTAAT
GAAAGCAGTGGTCCATCATTAAGACAACAAGTACTTCGTGGGCCCACAGCATCTGTAAAC
CTTTTACCACTTGCGGAGGGAAAAAGAAGTCGAAGTAGCACCCCTAAAGCCACCAACAAG
AAAGAAAAGAGAGTGGCACCTTTGAGAATCCGTCTTCCCAAGAAGAAGAAAAAGGGGGCC
TCTAGTGAAGATGAGTTGTCATCTGACAATGATTCTGACCTCGAATTTGAGCAAACACTG
GCAGCTGCAGCTCAAGCTGCGAGTGACAGCTCATCTAGTCGACCTTCTTCGAGAAGAAGC
AATCCGAGAAACAACAAGGGAAAAAAGAAACCACCTATAAAGAAAAAGAAGCTACTAAAA
GCAAATCCACAAGATGAAGATGGGTATGAAACTGATCACCAAGATTACTGTGACGTTTGT
AAACAAGGTGGTGAGATTATACTTTGTGATGGATGCCCAAGAGCATTTCATCTTGTCTGT
CTGGAGCCACCTCTGGATAAACCTCCGGAAGGAAGCTGGCCATGTCCTGTTTGCGTAAAA
AATGGAGTAAAACCTAAAGACAGAAGTGAATATCGCGACGATGATTTTATGCTTGATGAT
GAAGAGGAAGAAGATGAAGAAAACATGGATGATCACATGGAGTTCTGTTCTGTGTGCAAA
GATGGTGGTGATCTGCTCATATGTGATACCTGCCCACATTCTTACCATCTTAACTGCCTC
AACCCTCCTGTTGCTGTTGTGCCTGAAGGAGAGTGGTCATGTCCCAGATGTTCGTGCCCC
ATGCTCAAAGGCAAACTGCAGAGGGTGTTGGCATGGAGATGGAGAGAGGCACCTTACACA
GAGGTGCCTGATGAGAGGGCTGGTCAGGAAGGCAAAAAGAAGAAGCTGTGGGGTTACAAG
CAACGGGAGTTCTTAGTGAAATATGCAGAATATTCTTTTTGGGATGTTGATTGGATCACA
GAACTCCAAATGGAAATTTACTGCCCTCATCAGTGGAGAATGTATTTAAGACGAAATGAC
ATGGAAGAGCCAACTCCATTAGATGAAGATGATGACTGGACAGACAAAAACCTCATCGAG
AAATATTATAGATATGGAGTGCAACCTGAGTGGTTGAACATTCATCGCATTCTTAACAGC
AGAAAAGTTGGCCGGGGTCCTCAGGTTCAGTATTTAGTCAAATGGAAACAGTTGCCGTAT
GACAAAGCAACCTGGGAACCAGAAGACAAAGATATTCCAGGGATGAAGGAAGAAATTCAA
AAATATAAAGATCACAGGCAACTAATGGAAGGCGGACGCGAAAAGAGCAAAAAGAAAAAG
AGGAAGGACGACCGCAGCAAGCCCAAGAATGACCCGTCCGAAAAGTACGATGCCCAACCG
AATTTTATAACCGATCTTGGACTTTCCCTGCACGAATATCAGCTTGAAGGTCTCAATTGG
CTGCGGTTTTCATGGTCTCAGCACACGGACACAATCCTCGCCGATGAAATGGGCTTGGGC
AAAACTATTCAGACGATCGTCTTTGTAAAGTCTCTTGTTGTGGAGAACCATACTAAAGGT
CCATTTTTGATATCTGTTCCCTTGTCCACGATGATCAACTGGGAAAGAGAATTCGATCTT
TGGGCTCCAGAACTCTATGTTGTATCGTACTACGGTGATAGGGACGCAAGATCTGTAATC
CGTGAAAACGAGTTTTCATTTGATGATGGCGCCATTCGTTCCAGCAAAATGGCGTATAGA
ATGAAGAGCGGATGCCAAGTCAAGTTTCACGTGTTGCTGACGTCATATGAGATGTGCACC
ATCGACGCTACGACTTTGGCTTCCGTGGATTGGGCGATGGTCTGCATAGACGAGGCCCAC
AGACTGAAAAACAACCAGTCCAAGTTTTTCAAGGTGCTGTCTGATTACAATGTTGGCCAC
AAGCTGCTACTTACTGGAACGCCACTGCAGAACAATCTAGAAGAATTGTTCCATCTGCTA
AATTTCCTCTGCCCAGCGAAGTTCACTGACATGAACGGATTCTTGGATGAGTTTGCTGAG
ATTGCCAAAGAAGACCAAGTCAAGAAGCTTCACGAATTGCTCGGTCCACATATGTTGCGT
CGACTTAAGGCTGATGTGCTGAAGGGATTGGTCGCAAAAAGTGAGTTTATTGTTCGAGTC
AACCTCACACCGATGCAGCGTAAGTTTTACCGATATATCCTTGCCCGAAACTTTGACGGC
CTCAACTCTCGTGGTGGTCCAAACAATTCATCCCTACTCAATATTATGATGGACCTCAAG
AAATGTTGCAATCATCCGTATTTATTCAACAAAGCTGCCGAGGAAGCACCACGATCAGCT
AATGGTGCCTTCGACGGTACTGAGATGACAAAGAATGGTGGAAAGTTGATCGTTCTGCAG
AAGATGATGCGAAAGTTAAAGGACAGGGGAAACAGAGTTCTTATATTTTCGCAGATGACA
CGCATGTTAGACATCTTGGAAGATTTTCTCGAATACGAAGGATACAGATATGAGAGAATT
GACGGAACCATTACAGGTTTAGTGCGGCAAGAAGCAATTGATCGTTTTAACGCTCCGAAC
TCCGATCATTTCGCTTTCTTGCTTTCAACTCGTGCTGGAGGTTTGGGAATCAACTTGGCC
ACAGCCGACACAGTGTTTATATATGACAGTGATTGGAATCCACACAACGACATCCAGGCC
TTCAGTAGAGCGCATAGAATCGGTCAGACCAATAAAGTTATGATCTATCGGTTTGTCACC
AAGAACTCGGTCGAAGAAAGAGTAGCTGAGGTTGCTAAGCGGAAAATGATGCTGACTCAT
CTTGTGGTGCGTCCGGGCATGGGATCTTCCAAAACCACGAGCATGACGAAGCAGGAATTG
GACGACATTCTACGATTCGGCACCGAAGCACTATTTAAAGACGATGACGACGCCGAAGGT
AGCAACGATTTTATTCATTACGACGACCGCGCTATCGAAGCTTTGCTCGATCGTAGCAAG
GAGGGTGTCGAGGCGAAAGAAAAAGAAAACTCACAAATGAACGAATACCTCAGCTCTTTC
AAAGTCGCCACATACCAATACACCGATACACACGTCGAGCCTGAACCGGAGCGAGAAATC
ATCCAAGAGACGATGGAACAACCTGATCCCAATTACTGGGAGCGACTGTTACGTCACCAT
TACGAGCAACAACAAGAAGAAATCGCGTCCACCCTGGGCAAGGGAAAACGAGTCCGAAAA
CAGGTCAACTATTATCATGCTGAGACTGCTACCGAAGTAGACCGAGCAGCTGGCGGGTGG
GATGACAATGGTAGTGATTACAGTGGATTAAGTGACACGGTTGAAGACGATGACGAAGAG
TTCGATAACACCGAAGGTCGAAAACGCGGTCGACGAGACAAGGACCGACCTTTGCCCCCG
ATGTTGGCCAGAGTCGGTGGAAACATTGAGGTTCTCGGTTTTACGTCGAGACAACGTCGT
ACTTATCTAAATTTCGTGATGAGATACGGAATGCCACCGACGGAAAACTTCCAAAGCCGA
TGGTTGGTGAGGGAACTAAGAGGAAAATCAGAGAAAGAATTCAGGGCGTACACATCTTTA
TTTATGCGACATTTGTGTGAGCCTGGTCCTGACAATGCGGATACATATTCAGACGGTGTA
CCACGAGAGGGCGTATCACGACAACATGTCCTCACACGTATTGGCGTTATGTCTCTTATA
CATAAGAAGGTGG
PANTHER |
CHD3 (IPR028722) - T[114-203] 0.0 - T[233-1450] 0.0 |
Pfam |
CHD_N (IPR012958) - T[141-193] 1.7E-17 |
SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[330-389] 3.54E-17 - T[415-480] 6.02E-17 |
Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[332-390] 1.9E-19 - T[412-471] 2.9E-19 |
ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[340-387] 10.602 - T[419-466] 10.416 |
SMART |
Znf_PHD (IPR001965) - T[342-385] 4.3E-13 - T[421-464] 3.0E-14 |
Pfam |
Znf_PHD-finger (IPR019787) - T[342-385] 1.3E-10 - T[421-465] 3.5E-10 |
SMART |
Znf_RING (IPR001841) - T[343-384] 0.36 - T[422-463] 0.023 |
ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[343-384] . - T[422-463] . |
ProSiteProfiles |
Znf_RING (IPR001841) - T[422-464] 8.904 |
SMART |
Chromo/chromo_shadow_dom (IPR000953) - T[469-546] 0.95 - T[576-633] 4.5E-12 |
SUPERFAMILY |
Chromo-like_dom_sf (IPR016197) - T[471-547] 3.02E-6 - T[561-632] 8.61E-16 |
ProSiteProfiles |
Chromo/chromo_shadow_dom (IPR000953) - T[578-640] 11.472 |
Pfam |
Chromo_domain (IPR023780) - T[580-631] 1.2E-13 |
CDD |
Chromo/chromo_shadow_dom (IPR000953) - T[580-631] 8.96963E-12 |
SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[655-907] 8.06E-51 - T[909-1182] 7.39E-69 |
SMART |
Helicase_ATP-bd (IPR014001) - T[672-884] 1.5E-29 |
Gene3D |
SNF2-like_sf (IPR038718) - T[673-916] 3.5E-192 |
ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[688-872] 21.525 |
Pfam |
SNF2_N (IPR000330) - T[692-974] 5.1E-60 |
CDD |
Helicase_C (IPR001650) - T[997-1122] 1.96644E-30 |
Pfam |
Helicase_C (IPR001650) - T[1004-1114] 1.0E-19 |
ProSiteProfiles |
Helicase_C (IPR001650) - T[1004-1167] 19.94 |
SMART |
Helicase_C (IPR001650) - T[1030-1114] 1.4E-24 |
SMART |
DUF1087 (IPR009463) - T[1233-1298] 6.2E-32 |
Pfam |
DUF1087 (IPR009463) - T[1239-1295] 1.3E-24 |
SMART |
DUF1086 (IPR009462) - T[1317-1450] 1.2E-74 |
Pfam |
DUF1086 (IPR009462) - T[1329-1450] 2.1E-51 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
CHD3_HUMAN | 55.047 % | 1484 | 0 |
CHD5_HUMAN | 60.502 % | 1431 | 0 |
CHD2_HUMAN | 44.545 % | 530 | 9.37E-161 |