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- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S12.g00512.01.t
Possible name(s)
ATOH1; NEUROD4; NEUROD6
Gene model
Location
S12 [203,512 / 204,801]
Amino acid sequence
Length: 351
>Phmamm.CG.MTP2014.S12.g00512.01.p
MATTVQYFEGNYDNEHPFDAGLWPQRLDENSFVETSRKRKVSSMGNPQKKRRRVNAAGKE
RERLRAFNDALESLQSVLPIRFTENRKMYKKQTLQLAIRYIQFLRSCAAGERDWSERSRF
WCGREDKVAIGAMDAVSHSSVTDIPAKQHQTHTVVPNTHYTGHNEYVDQCESLTPLEATD
CSSVPFISHGNTTHTLEPNLAFGTLPETDVDSRQHGDEYLPIIGQMDYPETSTCPDNASG
SIGFTRYHSVATPPGYTVVNESFTSYQSYMQGRCIELTATDKLKTNPPSEADLNDIPLSD
LLNSEAISEKRTDFKSFDDEMLTHLEEILSSPDTSTPSSPESGFASFSSCK
Nucleotide sequence
Length: 1,056
>Phmamm.CG.MTP2014.S12.g00512.01.t
ATGGCAACAACAGTACAATACTTCGAAGGAAATTATGATAACGAACATCCATTCGATGCG
GGACTCTGGCCCCAAAGGCTCGACGAGAATTCATTTGTGGAAACTTCGCGTAAACGAAAA
GTCTCATCAATGGGGAACCCCCAAAAGAAACGACGCAGAGTGAACGCTGCCGGAAAGGAA
CGAGAAAGACTTCGGGCATTCAACGACGCTTTGGAATCGTTGCAAAGCGTGCTACCAATT
CGATTCACCGAAAATAGAAAAATGTACAAGAAACAAACTCTACAGTTGGCAATCCGATAC
ATCCAATTTTTGCGCTCGTGTGCTGCTGGGGAACGGGATTGGAGCGAACGATCGCGATTT
TGGTGTGGTAGAGAAGACAAAGTGGCGATTGGTGCTATGGATGCTGTTTCCCATTCTTCT
GTTACGGACATACCAGCAAAGCAGCACCAAACACACACCGTTGTTCCCAATACACACTAC
ACTGGGCATAACGAATACGTCGATCAATGTGAAAGTTTAACGCCCCTAGAAGCTACCGAT
TGTTCTTCAGTACCTTTTATCAGCCATGGAAATACAACCCACACTTTGGAACCCAACCTT
GCGTTTGGCACATTGCCCGAAACTGATGTGGATTCGAGACAACATGGTGACGAGTACCTA
CCGATCATTGGACAAATGGATTATCCCGAAACGAGTACCTGCCCCGACAATGCAAGTGGC
TCAATCGGATTCACCCGTTACCATAGCGTGGCCACTCCTCCTGGGTACACTGTCGTCAAC
GAAAGCTTTACATCGTACCAAAGCTACATGCAGGGTCGGTGTATAGAGCTGACTGCGACC
GACAAGCTAAAGACCAACCCACCATCGGAGGCAGATTTAAACGACATTCCCCTGTCGGAT
CTACTAAACAGTGAAGCCATATCAGAAAAACGGACAGATTTCAAATCGTTCGATGACGAA
ATGTTAACTCATTTGGAGGAAATTTTGTCATCGCCAGACACGTCAACACCAAGCAGTCCT
GAGAGCGGTTTCGCATCGTTTAGCAGTTGTAAATAA
| PANTHER |
Twist-related (IPR015789) - T[33-195] 6.5E-31 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[43-108] 5.4E-13 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[45-109] 1.83E-11 |
| CDD |
bHLH_dom (IPR011598) - T[49-105] 5.84097E-10 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[51-104] 12.976 |
| Pfam |
bHLH_dom (IPR011598) - T[52-104] 7.5E-9 |
| SMART |
bHLH_dom (IPR011598) - T[57-110] 6.1E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|