Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S12.g00515.01.t

Possible name(s)

PSMA5; PSMA7; PSMA8

Gene model

Phmamm.CG.MTP2014.S12.g00515

Location

S12 [207,935 / 209,680]

Sequences

Amino acid sequence

Length: 241

>Phmamm.CG.MTP2014.S12.g00515.01.p
MFMTRSEYDRGVNTFSPEGRIFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRITSPLIV
ASSIQKIFEIDTHVGCAMSGLIADSKTMIDRARVEAQNHWFTYDEKMSVESITKAVSNLA
LQFGEEDSEPGAMSRPFGVALLFAGYDEWGPQLYHLDPSGTFVKCLAKAIGSASEGAQTS
LEEQYHKSITLKEACKSVLGILKQVMEEKLTSTNVEVSTITKEQKFHMFSKDEVEEVIKD
L

Nucleotide sequence

Length: 726

>Phmamm.CG.MTP2014.S12.g00515.01.t
ATGTTTATGACAAGATCTGAATATGATCGAGGTGTGAACACTTTTTCACCTGAAGGAAGA
ATCTTCCAAGTTGAATATGCTATTGAAGCAATTAAGTTGGGATCCACAGCTATTGGAATC
CAAACTTCTGAAGGAGTTGTGTTAGCAGTTGAAAAAAGAATTACTTCACCTTTAATTGTG
GCATCAAGCATTCAAAAAATATTTGAAATTGACACTCATGTCGGTTGTGCAATGAGTGGT
CTGATTGCGGATTCAAAAACCATGATTGACAGAGCAAGAGTTGAAGCCCAAAATCATTGG
TTTACATATGATGAAAAAATGAGTGTGGAAAGCATAACAAAAGCAGTTTCAAATTTAGCT
TTGCAGTTTGGTGAAGAAGACTCAGAACCTGGAGCAATGAGCAGACCATTTGGTGTAGCT
TTGTTATTTGCTGGATATGATGAGTGGGGACCACAACTTTATCACCTTGACCCCTCTGGG
ACATTTGTTAAATGTTTAGCTAAAGCAATTGGTTCAGCATCTGAAGGTGCTCAAACCTCA
CTGGAGGAACAATATCATAAATCAATTACCCTGAAAGAAGCATGTAAATCTGTGCTTGGA
ATTTTGAAACAAGTAATGGAGGAAAAACTGACATCGACCAACGTTGAAGTTTCGACCATA
ACAAAAGAGCAGAAATTCCACATGTTTAGTAAAGATGAAGTTGAAGAAGTTATCAAGGAC
TTGTAG

InterProScan

Gene3D	Ntn_hydrolases_N (IPR029055) - T[1-241] 5.6E-92
SUPERFAMILY	Ntn_hydrolases_N (IPR029055) - T[7-239] 2.02E-78
CDD	Proteasome_alpha_type_5 (IPR033812) - T[8-220] 2.83095E-147
SMART	Proteasome_asu_N (IPR000426) - T[8-30] 1.3E-10
Pfam	Proteasome_asu_N (IPR000426) - T[8-30] 1.8E-13
ProSitePatterns	Proteasome_asu_N (IPR000426) - T[8-30] .
ProSiteProfiles	Proteasome_alpha-type (IPR023332) - T[23-238] 82.475
Pfam	Proteasome_sua/b (IPR001353) - T[31-220] 2.1E-57

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PSA7_HUMAN	34.874 %	157	1.42E-47
PSMA8_HUMAN	38.075 %	157	1.2E-47
PSA5_HUMAN	79.253 %	409	8.94E-147