Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S12.g00521.02.t

Possible name(s)

COX4I1; COX4I2

Gene model

Phmamm.CG.MTP2014.S12.g00521

Location

S12 [229,200 / 230,211]

Sequences

Amino acid sequence

Length: 174

>Phmamm.CG.MTP2014.S12.g00521.02.p
MASNILRTIVNKGVGRQLRILNVARMSSTADVVDHGLKINEDFYESVYSPLPDRPRSLPV
AEDLKALKEKELGDWSNLTVDEQMDLYNMHFSMTMGDMVRGNDTWKSSMGLVFLISSLGF
AFIILCKKFILPPPPITYSDEWVHASIKKQLRMHSGPITGIASKWDYENNCWKK

Nucleotide sequence

Length: 525

>Phmamm.CG.MTP2014.S12.g00521.02.t
ATGGCGTCGAATATTCTGCGAACTATCGTGAACAAAGGGGTTGGAAGGCAACTACGTATA
TTAAACGTGGCTAGAATGAGCAGCACAGCAGATGTTGTCGACCATGGCCTTAAAATTAAT
GAAGACTTTTACGAAAGTGTTTATTCCCCACTTCCGGATAGGCCACGTTCACTTCCTGTA
GCAGAGGACCTCAAGGCACTGAAAGAAAAGGAACTTGGCGATTGGAGCAACCTCACAGTG
GATGAGCAAATGGACTTGTACAACATGCATTTCAGCATGACTATGGGTGACATGGTTCGT
GGCAATGACACATGGAAGTCATCTATGGGCCTTGTTTTCTTAATAAGCAGTCTTGGGTTT
GCATTTATTATACTGTGCAAGAAGTTCATCTTACCACCTCCTCCAATAACATACAGTGAT
GAATGGGTCCATGCTAGCATCAAAAAACAACTTAGAATGCACAGTGGCCCCATTACTGGT
ATTGCATCTAAATGGGATTACGAAAACAACTGCTGGAAGAAGTAA

InterProScan

PANTHER	Cyt_c_oxidase_su4_fam (IPR004203) - T[26-174] 9.9E-33
Gene3D	Cyt_c_oxidase_su4_sf (IPR036639) - T[29-174] 2.3E-40
SUPERFAMILY	Cyt_c_oxidase_su4_sf (IPR036639) - T[31-174] 2.48E-36
PRINTS	Cyt_c_oxidase_su4 (IPR013288) - T[44-57] 2.7E-11 - T[88-106] 2.7E-11 - T[129-142] 2.7E-11 - T[157-173] 2.7E-11
Pfam	Cyt_c_oxidase_su4_fam (IPR004203) - T[46-173] 4.7E-35
CDD	Cyt_c_oxidase_su4_fam (IPR004203) - T[49-167] 2.84202E-37

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
COX41_HUMAN	37.143 %	102	4.49E-28
COX42_HUMAN	35.948 %	108	1.4E-30