- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1312.g14448.01.t
Possible name(s)
GNRHR; NPSR1; OXTR
Gene model
Location
S1312 [27,330 / 40,607]
Amino acid sequence
Length: 416
>Phmamm.CG.MTP2014.S1312.g14448.01.p
GMTTALAVTSPSIVDFNATENVTSPCVPHDQIVTMWFSFDTLHLVRVLVTWVLFAFSMTG
NTFVLWSLRGSRARHFIMFHLTLSDLIYTLFVMPADAVWNTTMQWIAGDFMCRTCQMMKQ
FGMYSSSFMVAVIGVDRVTGILSPLPTESQRKRGVVMVAIAWATSFICCLPAGVIFSVLT
VPTCENINVYQCVDFQVVTDRSLLPPYYLFTMLMSFVLPLICTLVSYSLIVCEISNMKER
DRVLMGRRNSVNTASMRRAKQRTIMMRTLITLTFLICWGPYYGKGLYDWFRPSDHTPPAA
VDTAMYIMMYFNPVLHPLVFGIFMKEIRTKFIKRLVCFRKHFFKRGSRRMSSVSRTSYSS
YVTATTQLTSSPRNVNNNSYRLPPLRGATKRLLPLTTNDPKVALKQRAADDKESAF
Nucleotide sequence
Length: 2,194
>Phmamm.CG.MTP2014.S1312.g14448.01.t
CCGGAATGACGACTGCCCTTGCTGTGACGTCACCGTCCATCGTTGATTTTAACGCAACAG
AAAACGTCACGTCACCATGTGTACCACACGATCAAATCGTCACGATGTGGTTCAGTTTCG
ACACGCTCCACTTGGTTCGAGTTTTGGTCACGTGGGTGCTCTTTGCCTTCAGTATGACCG
GAAACACATTCGTATTATGGTCACTACGTGGCAGCAGAGCACGACACTTCATTATGTTCC
ACTTGACGTTGAGTGACCTTATCTACACCTTATTCGTCATGCCAGCAGATGCTGTCTGGA
ACACGACAATGCAGTGGATAGCTGGAGATTTCATGTGTCGAACATGTCAGATGATGAAAC
AGTTTGGAATGTATTCCAGCTCATTCATGGTTGCAGTGATCGGAGTGGACAGAGTTACTG
GTATCTTGTCACCATTACCCACAGAAAGCCAACGCAAAAGAGGTGTTGTTATGGTTGCCA
TAGCGTGGGCAACAAGCTTCATTTGTTGTCTTCCAGCTGGCGTCATATTCTCCGTACTCA
CAGTGCCGACGTGCGAGAACATCAACGTCTACCAGTGTGTCGATTTCCAGGTTGTGACAG
ATCGTTCCTTGCTGCCCCCATATTACTTGTTCACGATGTTGATGAGCTTCGTGCTGCCAC
TAATATGTACTTTGGTCAGCTATTCGCTCATCGTGTGCGAAATATCCAACATGAAAGAAC
GAGACCGAGTTCTGATGGGACGAAGAAACAGTGTTAACACAGCCTCCATGCGACGGGCCA
AGCAAAGAACGATAATGATGCGAACCCTTATAACTCTCACCTTCCTTATCTGCTGGGGTC
CTTACTATGGAAAGGGATTATACGATTGGTTCAGACCATCTGACCATACACCACCAGCCG
CTGTCGACACGGCAATGTACATAATGATGTACTTCAATCCTGTTCTACACCCGCTGGTAT
TCGGAATCTTCATGAAGGAGATTCGAACGAAGTTTATCAAGCGACTTGTCTGCTTCAGGA
AACACTTCTTTAAGCGCGGGTCTCGCAGAATGAGCTCCGTATCCCGGACGTCATACAGCA
GTTACGTCACAGCAACAACGCAGTTGACGTCATCGCCCCGGAACGTGAACAACAATTCCT
ATCGACTCCCGCCACTCCGAGGTGCCACCAAACGGCTGTTACCTTTGACTACTAATGACC
CCAAAGTGGCGCTCAAACAACGAGCTGCTGATGACAAGGAATCGGCCTTTTGAAGGTTGA
AAGTCGNTAAAACAACCACAGGAAGTAGTTAATGTGCATAACCTTTAACTGTATTGGTCT
TGTACAAACGTATCGACTCCCGCCACTCCGAGGTGCCACCAAACGGCTGTTACCTTTGAC
TACTAATGACCCCAAAGTGGCGCTCAAACAACGAGCTGCTGATGACAAGGAATCGGCCTT
TTGAAGGTTGAAAGTCGACTGTGAAGGTGATGAATAAACGATGGGCCAAGGAGCATTGAT
TCACACTGGGTGTGTAATCGTAATAGGAAGGTGTACAATGACTTGGGTAAATCTAACAAA
ACCATGACTCCGCACATTTGACGAAACATTGGTAATGCATTTGTTTTCGTCATCACAGAA
GAGTGTTTTTGATGTACTACGGTATATACGTGATACATATTTATCAATTTGTATGAAATA
TAATCCGGTTCAAGAATGGTGTGTACCCCCAAAAAACAATGAATCTAAACAATGTATATT
TTTGCACAAGTTATGTTTTAAATGCACTTCGTTAACCACATGTCGTCACAGTACCCACCT
GCTACAGTAAGTACAACAAACATTTTCGATAATGTTACGTTGTCTCTTGGGTCTTGAAGT
AACATAAAACTGCACGAGATTTTGTCGATTTTACAGACACTTTTTCCAAATTCAAATCAC
AAAATTTAACGTGACTTCGCCCCCCCCCCTAACATAAAACTGCACGAGATTTTGTCGATT
TTACAGACACTTTTTCCTAATTCAAATCACAAAATTTAACGTGACTTCGCGTGGCATTTG
TTTCACACCAAAGCACGTGGCATTGAAACTGCATAGTTATTAACTGATCTTTCCACTTGG
ACAAAACGTTTCTCTCCACAGACATTTGCAATAAATATCCAAAAAATCTTTAAACTCAAG
AGGTGCGTGCAGTGTCAATGTGTTAAAAAACGAC
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[45-69] 2.7E-23 - T[74-95] 2.7E-23 - T[119-141] 2.7E-23 - T[153-174] 2.7E-23 - T[208-231] 2.7E-23 - T[263-287] 2.7E-23 - T[302-328] 2.7E-23 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[45-320] 30.663 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[73-319] 3.1E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GNRHR_HUMAN | 31.164 % | 144 | 1.07E-39 |
| GNRR2_HUMAN | 31.365 % | 112 | 2.69E-28 |
| NPSR1_HUMAN | 25.625 % | 102 | 3.48E-24 |