Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S131.g03863.01.t

Possible name(s)

PAF1

Gene model

Phmamm.CG.MTP2014.S131.g03863

Location

S131 [31,023 / 36,100]

Sequences

Amino acid sequence

Length: 307

>Phmamm.CG.MTP2014.S131.g03863.01.p
MAPTVQKPGQRSDDKHRSRTSVERGSGLITRVKYCNTLPDIPFDPKFIRYPFDANRFVEY
KPTSLEKLHKTELHTDHDLGVVIDLINPNTYKIDRNTWLDPADEALLEEDLPAPQDSKRS
KQHSKNVSWLRRSEYISQEFNRYGVSAVNIETRIGGGVKDLFKQEEMYKDRDGQIAAIQK
TFEDAKQEITKHHSKPNVYPVDVLPIYPDTKVVYLQIYMFLNILCLNPAIPGKPQQEQIE
EMSQAMIRGMVDEEGDQFVAYFLPTPETRGKRKRDNEEGLEVRLSKRRAKGGGGVQSATN
AVLAVRH

Nucleotide sequence

Length: 921

>Phmamm.CG.MTP2014.S131.g03863.01.t
ATGGCACCAACGGTGCAAAAACCTGGCCAACGATCAGACGACAAACACAGGTCAAGAACA
TCTGTGGAAAGAGGCAGTGGTCTTATTACGAGAGTAAAATATTGCAACACTTTGCCTGAT
ATTCCATTTGATCCAAAATTTATCAGATATCCATTTGATGCAAACAGATTTGTTGAATAC
AAACCAACATCACTGGAAAAGCTTCACAAGACCGAACTGCACACAGACCATGATCTGGGT
GTTGTCATCGATCTTATCAACCCAAACACTTACAAGATTGATCGTAACACATGGCTCGAT
CCAGCTGATGAAGCTTTACTTGAAGAGGATCTGCCAGCTCCACAAGACTCAAAAAGATCT
AAACAGCATAGTAAGAATGTGTCATGGTTGAGAAGAAGTGAATACATTTCCCAGGAGTTC
AACAGATATGGTGTATCAGCTGTTAACATCGAAACAAGGATTGGTGGTGGAGTGAAGGAT
TTGTTCAAACAAGAAGAGATGTATAAAGATCGTGATGGTCAAATTGCTGCCATTCAAAAA
ACTTTCGAAGATGCGAAACAAGAAATTACAAAACATCACAGCAAACCTAATGTCTACCCA
GTGGATGTTCTGCCTATCTACCCAGACACTAAGGTGGTTTATTTACAAATTTACATGTTT
TTAAATATTTTATGTTTAAACCCAGCGATCCCTGGTAAACCACAACAAGAACAAATTGAA
GAAATGTCACAAGCCATGATAAGAGGTATGGTAGATGAGGAAGGCGATCAGTTCGTCGCA
TATTTCCTCCCGACGCCGGAAACTCGGGGAAAGAGAAAGCGTGACAATGAAGAAGGCCTT
GAAGTTCGATTGAGCAAGCGAAGGGCCAAGGGAGGAGGTGGCGTGCAATCAGCTACGAAT
GCTGTCCTAGCTGTACGACAT

InterProScan

PANTHER	RNA_pol_II-assoc_Paf1 (IPR007133) - T[1-279] 2.2E-99
Pfam	RNA_pol_II-assoc_Paf1 (IPR007133) - T[28-281] 2.0E-94

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PAF1_HUMAN	52.473 %	343	1.8E-115