- Transcript 'Phmamm.CG.MTP2014.S1...' >
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- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S134.g03942.01.t
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
S134 [158,956 / 161,607]
Amino acid sequence
Length: 323
>Phmamm.CG.MTP2014.S134.g03942.01.p
MDVPAVVVDNGSGMCKVGLAGDDAPRAVFPSIVGRPIHEGEMDQENSYVGDEAQSKRGVL
TLAYPIERGIVTNWDDMEKIWHHTFYNELRVAPEEYPILLTEAPLNPKANREKMTQIMFE
NFNTPAMYVAVQAVLSLYVSGRTTGIVLDSGDGVSHTVPIYGGYAIPHGIIRLDLAGRDL
TDYYMKILTERGYSFTTTGNERFRCPETLFQPGIIGMESAGVHETTYNSIMMCDEDIRKD
LFANTELSGGSTMFSGIAERMQKEISNLAPPSMKIKIIAPPERKYSVWIGGSILASLSTF
QQIWISKQEYDESGPAIVHRKCF
Nucleotide sequence
Length: 972
>Phmamm.CG.MTP2014.S134.g03942.01.t
ATGGACGTACCTGCAGTGGTTGTTGACAACGGATCTGGAATGTGCAAAGTCGGCTTAGCT
GGAGATGACGCACCTAGAGCGGTGTTTCCTTCAATTGTCGGACGTCCAATACATGAGGGT
GAGATGGACCAAGAGAACAGTTACGTTGGAGATGAAGCTCAAAGCAAGCGTGGTGTTCTA
ACCCTTGCATACCCAATTGAGCGCGGAATTGTTACGAACTGGGATGATATGGAAAAGATC
TGGCATCACACATTCTACAACGAACTTCGTGTTGCTCCTGAAGAATATCCAATCTTGCTT
ACTGAAGCCCCGTTGAATCCAAAAGCAAACCGAGAGAAAATGACTCAAATTATGTTTGAG
AACTTTAACACGCCTGCAATGTACGTTGCTGTACAAGCTGTTCTTTCTCTTTATGTCTCC
GGCCGAACCACAGGAATTGTTTTGGACAGTGGTGACGGTGTTTCGCATACTGTTCCAATT
TACGGAGGATACGCCATCCCGCACGGCATCATCCGGTTAGATTTGGCTGGTCGCGATTTG
ACTGATTACTACATGAAGATTCTCACCGAGAGGGGATACTCATTTACGACAACAGGGAAT
GAAAGATTTCGATGTCCCGAAACCCTATTTCAGCCAGGAATTATTGGTATGGAATCTGCA
GGTGTCCATGAGACTACGTACAACTCTATCATGATGTGTGATGAAGACATCAGAAAAGAT
TTGTTTGCCAACACTGAGCTTTCCGGGGGAAGCACAATGTTTTCAGGTATTGCTGAGCGT
ATGCAAAAAGAAATTTCGAACCTCGCTCCACCATCCATGAAGATCAAGATCATTGCTCCT
CCTGAGCGCAAATATTCAGTATGGATCGGAGGATCTATTCTTGCATCCCTCTCCACTTTC
CAACAGATTTGGATCTCGAAACAAGAGTACGACGAATCTGGACCAGCAATCGTGCATCGC
AAGTGCTTCTAG
| Pfam |
Actin (IPR004000) - T[2-194] 2.2E-71 - T[197-323] 3.2E-50 |
| SMART |
Actin (IPR004000) - T[3-323] 1.2E-172 |
| PANTHER |
Actin (IPR004000) - T[4-198] 1.9E-200 - T[197-322] 1.9E-200 |
| PRINTS |
Actin (IPR004000) - T[24-33] 2.5E-42 - T[44-55] 2.5E-42 - T[56-78] 2.5E-42 - T[110-123] 2.5E-42 - T[135-154] 2.5E-42 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[48-58] . - T[304-312] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[99-111] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 73.387 % | 566 | 0 |
| ACTB_HUMAN | 73.925 % | 568 | 0 |
| ACTA_HUMAN | 72.849 % | 557 | 0 |