Login
Help

Submit your Data

  1. Transcript 'Cisavi.CG.ENS81.R12....'
  2. Molecular Tool 'Gli-MO (Imai 2009)'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1352.g14564.01.t

Possible name(s)

COL12A1; COL21A1; COL28A1

Location

S1352 [32,804 / 38,895]

Sequences

Amino acid sequence

Length: 364

>Phmamm.CG.MTP2014.S1352.g14564.01.p
MDVQVSRLELELPFPQKLEMNLEFTLELNLSLKISQPTDIVFLVDSTSSITNSQFETYRN
AFLTLADSLGTGFASNLLQVAILQYGNNNILGLDYNDNSFYQNPTTLGNCTTVQCFRNAV
TTNMPHLLAGNTFTATAIERAVKIDFANSANAATSTKYLILTTDGAATDAHLLATSYGFI
SSANVTVYAIGIGSEVVQSELKTIANNGVSNDRVTMLADFLTLGETLINISSSLIPEVPP
ALLLRYSCSNEYYNTNNYKNDPTNNSNGYDNINNYNNDSTNNSNEYYSTNNYNNDPTNDN
NEYYNTNNYNYDSGNNINEYNNTSNYNNSNEYYNTNNCNNDPTNSSNEYYNTNNYNNDST
NNSN

Nucleotide sequence

Length: 1,095

>Phmamm.CG.MTP2014.S1352.g14564.01.t
ATGGATGTACAGGTTAGTAGATTAGAATTAGAATTACCATTTCCTCAAAAACTAGAAATG
AATCTAGAATTCACACTAGAATTGAATTTAAGCTTGAAGATTTCTCAACCTACCGACATT
GTGTTTCTGGTGGATAGCACTTCATCAATAACAAATTCTCAGTTTGAAACATACAGGAAT
GCTTTTCTGACATTAGCTGATAGTCTTGGAACGGGGTTTGCCTCAAATCTTCTGCAAGTA
GCTATTCTTCAGTACGGAAACAACAACATTTTGGGCCTTGACTACAACGACAACAGCTTT
TACCAGAATCCTACCACTCTTGGAAATTGCACCACAGTCCAATGCTTCAGGAATGCTGTG
ACTACTAATATGCCCCATCTTCTGGCAGGAAACACCTTTACTGCAACCGCCATCGAGAGA
GCTGTAAAAATCGACTTTGCTAACTCTGCTAACGCTGCAACTTCTACGAAGTATCTTATC
CTCACAACGGATGGTGCTGCAACCGACGCCCATTTATTGGCAACCAGTTACGGCTTCATC
AGTAGCGCCAACGTTACAGTTTACGCTATCGGAATTGGGTCTGAGGTTGTTCAAAGTGAG
CTTAAAACTATTGCCAACAACGGCGTCAGCAATGACAGAGTCACGATGTTGGCCGATTTT
TTAACTCTTGGTGAAACCCTAATAAACATTTCGTCAAGCCTTATACCGGAAGTGCCCCCT
GCTTTGTTGCTTCGGTACTCCTGTAGCAACGAGTACTACAACACCAACAACTACAAAAAC
GACCCCACAAACAACAGCAACGGGTACGACAACATCAACAATTACAACAACGACTCCACA
AACAACAGCAACGAGTACTACAGCACCAACAACTACAACAACGATCCCACAAACGACAAC
AACGAGTACTACAACACCAACAACTACAATTACGACTCCGGAAACAACATCAACGAGTAC
AACAACACCAGCAACTACAACAACAGCAATGAGTACTACAACACCAACAACTGCAATAAC
GACCCCACAAACAGCAGCAACGAGTACTACAACACAAACAATTACAACAACGACTCCACA
AACAACAGCAACTAG

InterProScan

Gene3D
vWFA_dom_sf (IPR036465) - T[30-239] 2.7E-26
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[35-227] 4.77E-25
SMART
VWF_A (IPR002035) - T[37-222] 4.6E-16
Pfam
VWF_A (IPR002035) - T[39-224] 6.0E-19
ProSiteProfiles
VWF_A (IPR002035) - T[39-234] 21.717

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





By clicking "SEND", you accept the terms of our Privacy Policy.