- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1358.g14587.01.t
Possible name(s)
CEACAM5; HMCN1; IGSF10
Gene model
Location
S1358 [21,227 / 24,887]
Amino acid sequence
Length: 480
>Phmamm.CG.MTP2014.S1358.g14587.01.p
MNESFDETEVKMYSSCSGTPCSDYGIIMKIRSKFLNDGKLFYSNETQLRNTETVCLQSAQ
WSGQDGLQCWRDKPYDALVIPQESADIIHTGSSVLLNGNQDVTLYCESDANPQANCSIQF
ENKTFGSCNITEHISSNQSVNCFAANGHGFDNSKPLELIVVQENKKIPDVRHGFNDTQQI
KVGDDLTLICSVLYEKELNTLFEWITPISDRKIDRNNSILELNNLTRFDWGNYTCLINNN
YGTAHSMVLVDVLFAAVTEFSNMVNCTYNDVQFGQCAFQFLSNPVVDEWILTANDKPYHA
LVISQDTTDIIHTGSRVLLNGNQDVTLFCDSDANPQANCSIQFANKTFELCNITEHISSN
QSVSCSAANAHGFDHSKPLELVVVQENEKIPDIRHDFNDKKQFKVGDDLTLNCSVLYQNE
FNTSFEWITPLNDRKVDRNTSILELNHLTRFDWGNYICLINNNFGTAHSTEFVDVLCECE
Nucleotide sequence
Length: 1,443
>Phmamm.CG.MTP2014.S1358.g14587.01.t
ATGAATGAATCCTTTGACGAAACTGAAGTAAAGATGTATTCCTCATGCTCAGGAACACCT
TGTTCTGATTATGGTATTATCATGAAAATCCGAAGTAAATTTTTGAATGACGGAAAGCTT
TTCTATTCAAACGAAACACAGTTGAGAAACACTGAAACCGTTTGTTTGCAATCAGCTCAA
TGGTCGGGTCAGGATGGATTACAATGCTGGAGAGACAAACCGTATGATGCACTTGTAATA
CCACAAGAGTCCGCCGACATCATTCACACCGGTTCAAGCGTACTACTTAATGGAAATCAA
GATGTGACGTTGTATTGTGAGAGCGATGCTAATCCACAAGCTAACTGCTCAATTCAATTT
GAGAACAAAACTTTTGGATCATGCAACATAACTGAACATATTAGCTCTAATCAATCAGTC
AATTGTTTTGCTGCAAACGGGCATGGATTCGATAATTCCAAACCACTGGAATTGATTGTT
GTACAAGAAAATAAAAAAATTCCTGACGTAAGACATGGATTCAACGACACACAACAAATC
AAGGTTGGAGATGACTTAACTTTAATCTGCAGTGTTTTGTATGAGAAAGAGTTGAATACG
TTATTTGAATGGATAACTCCCATCAGCGATCGGAAAATTGACAGAAACAATTCTATTCTG
GAATTAAACAATTTGACCAGATTCGACTGGGGAAATTACACTTGTTTAATTAACAACAAT
TACGGAACCGCACATAGCATGGTGCTTGTGGATGTTTTATTTGCCGCAGTTACGGAGTTC
AGCAACATGGTCAATTGCACTTACAACGATGTTCAATTCGGACAATGTGCATTTCAATTT
TTATCCAATCCAGTAGTGGATGAATGGATATTAACAGCTAATGACAAACCGTACCATGCA
CTTGTAATATCACAAGATACCACCGACATCATTCACACCGGTTCACGCGTACTTCTTAAT
GGAAATCAAGATGTGACATTGTTTTGTGACAGCGATGCTAATCCACAAGCTAACTGCTCA
ATTCAATTTGCAAACAAAACTTTTGAATTGTGCAACATAACTGAACATATTAGCTCTAAT
CAATCAGTTTCTTGTTCTGCCGCAAACGCTCATGGATTCGATCATTCCAAACCACTGGAA
TTGGTTGTTGTCCAAGAAAATGAAAAAATTCCTGACATAAGACATGACTTCAACGACAAG
AAACAGTTCAAGGTTGGAGATGACTTAACTTTGAACTGCAGTGTTTTATATCAAAATGAG
TTTAATACGTCTTTTGAATGGATAACTCCCCTTAACGACCGGAAAGTTGATAGAAACACT
TCTATTCTGGAATTAAACCATTTGACAAGATTTGACTGGGGAAATTACATTTGTTTAATT
AACAACAATTTCGGAACCGCTCATAGCACAGAATTCGTGGATGTTTTATGTGAGTGTGAA
TAA
| Gene3D |
Ig-like_fold (IPR013783) - T[162-264] 3.5E-10 - T[385-478] 3.3E-9 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[168-251] 9.373 - T[391-474] 9.246 |
| SMART |
Ig_sub (IPR003599) - T[175-253] 1.2E-4 - T[398-476] 0.18 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[177-253] 6.43E-10 - T[402-475] 6.51E-9 |
| SMART |
Ig_sub2 (IPR003598) - T[181-242] 0.033 - T[404-465] 0.16 |
| Protein Name | Identity | Bit Score | e-value |
|---|