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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R15....' > 
  2. Clone 'cien60702' > 
  3. Transcript 'KH2012:KH.C2.346.v1....' > 
  4. Transcript 'KH2012:KH.L95.1.v2.A...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S135.g03947.01.t

Possible name(s)

SMCHD1

Gene model

Phmamm.CG.MTP2014.S135.g03947

Location

S135 [1,638 / 9,086]

Sequences

Amino acid sequence

Length: 230

>Phmamm.CG.MTP2014.S135.g03947.01.p
MDNDEEDAFVYVYDRRSANVDSEKKKIHIGGVFAFDVFLEKIVKVRLRKFSIRSRESFLI
TTTGRNVICDDDTFVTMIESGDTLYLLKYLDQPLGAPVSERIEFQPHYDTLIKSGIYEYY
ASEGHINPLPFAFAELIDNALAATVKNKGPRCIEISLHINESTGKHALCVYDNGEGMSSR
QLNNWAIYRLSKFNRKERHERVNLVGNDNEDKSEDQPPDGAPKSLNSDIS

Nucleotide sequence

Length: 693

>Phmamm.CG.MTP2014.S135.g03947.01.t
ATGGATAATGACGAAGAAGATGCTTTTGTTTATGTTTACGACCGGCGGAGTGCAAATGTT
GATTCTGAGAAAAAGAAAATTCATATTGGTGGAGTTTTTGCCTTCGATGTATTTTTGGAA
AAGATTGTGAAAGTAAGACTAAGAAAATTCTCCATTAGGTCAAGAGAATCATTCTTGATA
ACAACGACAGGACGGAATGTGATTTGTGATGATGACACATTTGTTACAATGATTGAATCT
GGGGACACCCTTTACCTCCTGAAATATCTCGATCAACCTTTGGGAGCTCCTGTATCCGAG
AGAATTGAATTTCAACCTCATTACGATACATTGATAAAAAGTGGAATATATGAGTATTAT
GCCAGTGAAGGTCACATTAATCCGCTACCTTTTGCGTTTGCTGAACTGATTGACAATGCA
TTAGCAGCTACTGTCAAGAATAAAGGCCCCCGATGCATTGAGATAAGCCTGCACATTAAC
GAGTCAACCGGCAAACATGCATTGTGCGTTTACGACAATGGAGAGGGTATGTCATCACGG
CAACTCAACAACTGGGCAATTTACAGACTTTCGAAGTTTAACAGAAAGGAACGACATGAA
AGAGTGAATTTAGTTGGAAATGACAATGAAGATAAGTCTGAAGACCAACCACCAGATGGA
GCTCCTAAGTCACTCAACAGTGACATCTCATGA

InterProScan

SUPERFAMILY
HATPase_C_sf (IPR036890) - T[99-196] 7.47E-10
Gene3D
HATPase_C_sf (IPR036890) - T[115-204] 6.7E-8
CDD
HATPase_C (IPR003594) - T[132-184] 5.19863E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMHD1_HUMAN 46.847 % 183 4.96E-53