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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.358.v1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S135.g03963.02.t

Possible name(s)

VTI1A; VTI1B

Gene model

Phmamm.CG.MTP2014.S135.g03963

Location

S135 [181,195 / 182,789]

Sequences

Amino acid sequence

Length: 168

>Phmamm.CG.MTP2014.S135.g03963.02.p
MASLVKSYEQQFSTLTAEITQRIGTISLYHGAEKKSLISTIERQLDEAQELLEQMDLEVR
ELSSAERGKLMGRLKSYQHEFNNLESQIKKAKTSSINKANQMREELLGMDEYGNDDQKTR
LLDNTERLENSSRRLEIGYRVATETEKIGQDILDNLHRDRETINRSRQ

Nucleotide sequence

Length: 612

>Phmamm.CG.MTP2014.S135.g03963.02.t
GCGAAGAACAGATGTGCGAAGTGTTTTTGAATTGATTAATGCACATGAAAGGAAATAAAA
GTTTGTATAATCGCTTTTCTGTAACAAGGGAGTAGCTGGAAATAAAATATGGCATCGCTT
GTAAAATCCTATGAACAACAATTTTCAACCCTCACGGCGGAAATTACTCAAAGAATTGGA
ACAATTTCACTTTACCATGGAGCGGAAAAAAAATCACTTATAAGTACAATCGAAAGACAA
CTTGATGAAGCCCAAGAGCTGCTTGAACAAATGGATCTTGAAGTTCGAGAATTATCAAGC
GCTGAAAGAGGAAAGTTGATGGGAAGATTAAAAAGTTACCAACATGAGTTTAATAACTTA
GAATCTCAAATTAAAAAAGCCAAAACTTCATCGATAAATAAAGCTAACCAAATGAGAGAA
GAGTTACTGGGAATGGATGAATATGGTAATGATGACCAGAAAACAAGACTCCTTGATAAC
ACTGAAAGGTTGGAAAATTCCTCAAGACGTTTGGAAATTGGTTACAGAGTTGCCACGGAA
ACTGAAAAAATTGGACAGGATATTTTAGACAATTTGCACAGAGATAGAGAAACCATAAAC
CGAAGTAGACAA

InterProScan

Gene3D
v-SNARE_N_sf (IPR038407) - T[1-100] 4.0E-32
SUPERFAMILY
SNARE (IPR010989) - T[7-91] 4.32E-24
Pfam
Vesicle_trsprt_v-SNARE_N (IPR007705) - T[12-90] 2.4E-23

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VTI1A_HUMAN 49.405 % 161 1.29E-50