- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S137.g04004.01.t
Possible name(s)
EIF4A1; EIF4A2; EIF4A3
Gene model
Location
S137 [112,532 / 116,825]
Amino acid sequence
Length: 413
>Phmamm.CG.MTP2014.S137.g04004.01.p
MGESGYPGQGQGPSQDKLENLEGLIETNYTEICDSFDDMDLKEKLLRGIYAYGFEKPSAI
QQRAIKPCIDGHDVIAQAQSGTGKTATFAISILQNIDVSVQKSQALVIAPTRELAQQIQK
VILALGDYVKVNCHACIGGTSVRQEMTILENCAPHVVVGTPGRVFDMINRHVLDVRDVKM
FVLDEADEMLSRGFKEQIYEIFRKMPGDIQVILLSATMPTDVLEVTTKFMPEPIKILVKK
EELTLEGILQYFVLVEKEEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTQNLQKRDFT
VSSLHGDMEQSDRDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIH
RQVIEFIGRGGRFGRKGVAINFVTNDDRRTLKDIESFYNTSITEMPMNVADMI
Nucleotide sequence
Length: 1,242
>Phmamm.CG.MTP2014.S137.g04004.01.t
ATGGGAGAAAGCGGTTACCCTGGCCAAGGGCAAGGCCCAAGCCAAGACAAGCTTGAAAAC
TTGGAAGGCCTTATAGAAACCAATTATACTGAAATCTGTGATTCATTTGATGATATGGAT
TTAAAAGAAAAACTTTTAAGAGGAATCTATGCTTATGGTTTCGAAAAGCCATCTGCTATT
CAACAGAGAGCCATCAAACCATGCATTGATGGACATGATGTCATTGCTCAGGCACAATCA
GGAACTGGAAAAACAGCTACTTTTGCTATTTCCATACTGCAGAATATTGATGTGTCTGTG
CAAAAATCACAAGCACTTGTTATTGCACCAACTAGAGAACTGGCACAACAGATTCAAAAG
GTGATCTTGGCTTTGGGAGATTATGTCAAAGTCAACTGCCATGCTTGCATTGGTGGCACA
AGTGTTCGCCAGGAAATGACAATTCTTGAAAACTGTGCCCCACATGTTGTTGTGGGAACA
CCTGGAAGAGTTTTTGACATGATAAATCGTCATGTTTTAGATGTACGTGATGTTAAGATG
TTTGTTCTGGATGAAGCTGATGAAATGTTGTCTCGGGGTTTCAAAGAACAAATTTACGAG
ATTTTCAGAAAAATGCCCGGTGACATTCAAGTTATTTTATTATCGGCTACAATGCCTACT
GATGTGCTAGAGGTGACAACCAAGTTCATGCCGGAACCCATTAAAATCCTGGTAAAAAAG
GAGGAACTGACATTGGAGGGAATTCTGCAGTACTTCGTCTTGGTTGAGAAAGAAGAGTGG
AAATTGGACACACTGTGTGACTTATATGAGACACTTACCATAACACAGGCTGTAATTTTC
TTGAATACAAGAAGGAAAGTCGACTGGCTGACTCAAAATTTGCAAAAAAGAGACTTCACT
GTGTCTTCTTTGCATGGTGATATGGAGCAGTCTGACAGAGACTTGATTATGAGGGAATTT
CGATCTGGTTCCTCTAGAGTTTTAATTACAACAGATCTTCTTGCGCGTGGTATTGATGTC
CAGCAAGTGTCCTTGGTTATTAACTATGATTTGCCATCAAACCGTGAAAACTACATTCAT
CGGCAAGTCATTGAGTTTATTGGTCGTGGAGGTCGATTTGGTCGTAAGGGAGTTGCAATA
AACTTTGTTACCAATGATGACAGAAGGACTCTCAAAGACATTGAATCTTTTTATAACACT
TCAATTACTGAGATGCCAATGAACGTGGCAGACATGATTTAG
| PANTHER |
EIF4A (IPR037583) - T[16-413] 1.6E-193 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[34-62] 10.593 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[53-251] 8.4E-59 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[59-223] 2.2E-45 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[65-236] 30.597 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[102-394] 1.92E-70 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[182-190] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[247-413] 25.467 |
| CDD |
Helicase_C (IPR001650) - T[249-361] 3.00737E-35 |
| Pfam |
Helicase_C (IPR001650) - T[261-373] 1.2E-26 |
| SMART |
Helicase_C (IPR001650) - T[288-374] 5.6E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4A3_HUMAN | 67.885 % | 546 | 0 |
| IF4A1_HUMAN | 74.745 % | 607 | 0 |
| IF4A2_HUMAN | 73.544 % | 612 | 0 |