Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S139.g04033.06.t

Possible name(s)

EIF3M; PSMD13

Gene model

Phmamm.CG.MTP2014.S139.g04033

Location

S139 [119,064 / 123,645]

Sequences

Amino acid sequence

Length: 333

>Phmamm.CG.MTP2014.S139.g04033.06.p
IINATSKIWNETDPKDIEGIVNSILSLLFIIPLNQGKELVDLLCEQLLAGRAEAGKNALS
MKLLHNLFHGYQIKTPFLYKVYCTWIKVAGLSGSLHLLPTNLKEVNTWLEYWDAGEEGRQ
NLYRLLYQAHYKCGSSDEAAETMIRLLEGYTDDNAAQARDDAIKCITRAIADQNTYLFDQ
LLTLKPVNFLEGELIYDLLNIFVSGNVNDYKEFYASNNKFFQNLGLSHESNLRKIQLLTL
VDIVGVSREIGFDEIVNKLGLSHSEVEDFVIDAMQSKLIRARIDHVNRKILVSQACQRTF
GRPQWQILHTRLQQWKDNLKRVNEKLSTVSTHA

Nucleotide sequence

Length: 1,084

>Phmamm.CG.MTP2014.S139.g04033.06.t
CTATTATTAATGCCACATCCAAAATATGGAATGAAACTGATCCAAAAGACATTGAGGGAA
TTGTGAACAGCATTTTGTCTCTTCTTTTTATTATTCCATTAAATCAAGGCAAGGAATTAG
TGGATTTATTATGTGAACAACTTCTTGCTGGAAGAGCAGAAGCTGGAAAAAATGCTCTTA
GCATGAAACTATTGCACAACCTGTTTCATGGATATCAAATTAAGACTCCCTTCCTTTACA
AGGTTTACTGCACTTGGATAAAAGTAGCAGGTCTCTCAGGGAGTCTGCATCTTCTTCCAA
CCAATCTGAAGGAGGTGAACACTTGGCTTGAATACTGGGATGCGGGTGAAGAAGGACGTC
AAAACTTGTACAGGTTGTTATACCAGGCTCACTATAAATGTGGATCTTCCGACGAAGCGG
CTGAAACAATGATACGACTACTGGAAGGGTATACAGATGACAATGCAGCACAAGCAAGGG
ATGATGCTATTAAATGCATTACAAGGGCTATTGCAGACCAGAACACTTACCTTTTCGACC
AACTTCTCACATTAAAACCTGTGAATTTTCTTGAAGGAGAACTCATTTATGATCTTTTGA
ATATATTCGTCAGTGGAAATGTAAATGATTACAAAGAGTTTTATGCCTCAAACAACAAAT
TCTTTCAAAACTTAGGGTTATCACATGAAAGCAATCTCAGAAAGATTCAACTTCTTACAT
TGGTTGACATTGTTGGTGTTTCTCGTGAAATTGGTTTTGATGAAATTGTGAACAAACTTG
GATTGTCACATTCTGAAGTTGAGGATTTTGTGATTGATGCAATGCAAAGCAAACTTATTC
GTGCCAGGATTGATCATGTCAACCGAAAAATACTCGTCAGTCAAGCATGTCAGCGAACGT
TTGGGCGCCCCCAGTGGCAGATTTTGCACACTAGATTGCAACAATGGAAAGACAACTTGA
AACGAGTCAATGAGAAGCTATCTACAGTTTCAACACACGCATAAATTTTGTGTGTTTGTA
TCGTTGTTGCATTTGAAATTTGTGGTGGATGAAGGTTGAGAAAAACAGAGACAGAAACGG
CCCG

InterProScan

Hamap	eIF3m (IPR027528) - T[3-332] 18.469
ProSiteProfiles	PCI_dom (IPR000717) - T[135-297] 18.268
Pfam	PCI_dom (IPR000717) - T[196-293] 2.2E-14
SMART	PCI_dom (IPR000717) - T[226-315] 9.8E-15
SUPERFAMILY	WH_DNA-bd_sf (IPR036390) - T[233-293] 4.08E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
EIF3M_HUMAN	45.455 %	303	1.39E-101