- Molecular Tool 'cicl15f04-MO' >
- Transcript 'Moocul.CG.ELv1_2.S20...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1415.g14733.01.t
Possible name(s)
HERC1; RCBTB1; RCBTB2
Gene model
Location
S1415 [9,596 / 14,772]
Amino acid sequence
Length: 455
>Phmamm.CG.MTP2014.S1415.g14733.01.p
MNTSGCLGVGDNINSLEPRCVESFNGKKIVGMSSGCGPHVLVLTEDGDVFTWGHNSYMQL
GNGGTAPGLIPSPLSRHFCKKAIQVACGSHHSMVLTVDGEVWAWGYNNCGQVGSGSTSNQ
GAPRKVTACIGNKKIINIGCGQTASIAVTDGGEVYSWGYNGNGQLGVGNNVNQTNPCRIA
ALQGVVIQQVICGYAHTLALTDDGVVFGWGANSYGQLGSGNKANTVTPLQVWMWGQLRQQ
PTAEPKLTSFTNLNAVFAHFSGPPISWRPMVVCSEAEPSVHQSVSAAFNDEATSDLKIVS
EGKVIYVHKALLKIRCDYFRRMFQSHWGENNQDTVEINGYSYSVVYSFLQWLYTDHVELP
PEDAIGLLDLATSYCENGLKFQCQRLIKEGINEENAALLYAAAIKYQAQDLLDFCFQFCL
NHMTRVVQTDSFRILDKEMMLNFILQAAAKGAFKR
Nucleotide sequence
Length: 1,368
>Phmamm.CG.MTP2014.S1415.g14733.01.t
ATGAACACTAGTGGATGTTTGGGTGTCGGGGACAATATCAATTCTTTGGAACCCAGATGT
GTTGAAAGTTTTAATGGAAAAAAGATTGTTGGAATGTCGTCAGGTTGTGGACCACATGTT
CTTGTGCTAACAGAAGATGGGGATGTTTTTACTTGGGGTCACAACAGTTACATGCAACTG
GGCAATGGCGGGACTGCCCCAGGTTTAATTCCATCTCCTTTGTCTCGGCACTTTTGCAAG
AAAGCAATTCAGGTTGCTTGTGGTAGCCACCACTCAATGGTACTCACTGTTGATGGGGAG
GTTTGGGCATGGGGTTACAACAACTGTGGACAGGTTGGTTCAGGTTCTACATCAAACCAA
GGGGCACCAAGAAAAGTTACAGCTTGCATTGGAAACAAGAAAATTATTAACATTGGCTGT
GGACAGACTGCCTCAATAGCAGTGACAGATGGAGGAGAGGTTTATTCATGGGGTTATAAT
GGTAATGGACAGTTGGGTGTAGGAAACAATGTTAATCAAACAAACCCATGTCGAATTGCT
GCACTACAGGGTGTTGTTATACAGCAGGTGATATGCGGTTATGCCCACACTTTGGCGTTA
ACCGATGATGGTGTGGTGTTTGGTTGGGGAGCCAATAGTTATGGACAACTAGGATCTGGA
AACAAAGCCAACACTGTTACACCATTGCAAGTATGGATGTGGGGACAGTTACGTCAGCAG
CCGACCGCAGAACCAAAATTGACGTCATTTACCAACCTCAACGCCGTGTTCGCCCATTTT
AGTGGACCTCCGATTAGTTGGCGACCAATGGTGGTTTGCAGTGAAGCGGAGCCGTCTGTT
CACCAGAGCGTGTCGGCTGCTTTCAATGACGAAGCGACATCTGACCTCAAAATTGTCAGC
GAGGGAAAAGTAATCTATGTTCACAAGGCTCTATTAAAAATAAGGTGCGATTATTTTCGT
CGAATGTTCCAGTCTCATTGGGGAGAAAATAACCAAGACACGGTGGAAATTAACGGGTAC
AGTTACTCCGTAGTTTATTCCTTCTTGCAATGGCTTTATACCGATCACGTTGAACTGCCA
CCCGAAGATGCCATAGGTTTACTGGACCTGGCAACATCGTACTGTGAAAATGGTTTAAAA
TTCCAATGTCAGCGTCTTATCAAAGAAGGAATTAACGAGGAAAATGCGGCTTTACTTTAC
GCAGCTGCAATCAAATACCAAGCACAGGATCTTCTTGACTTCTGTTTTCAGTTTTGTCTC
AACCACATGACACGCGTGGTTCAAACCGACAGTTTTCGAATCCTTGACAAAGAAATGATG
TTGAACTTTATCCTTCAAGCTGCAGCGAAGGGAGCCTTCAAGCGCTAG
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[1-78] 2.9E-18 - T[80-261] 1.1E-50 |
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[2-236] 2.88E-67 |
| Pfam |
Reg_chr_condens (IPR000408) - T[46-95] 1.0E-11 - T[98-148] 1.6E-9 - T[152-200] 5.8E-14 - T[203-231] 1.5E-6 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[47-98] 14.986 - T[99-151] 13.519 - T[152-203] 17.459 - T[204-231] 8.896 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[48-64] 2.2E-13 - T[82-95] 2.2E-13 - T[101-117] 2.2E-13 - T[152-168] 2.2E-13 - T[190-206] 2.2E-13 - T[206-220] 2.2E-13 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[85-95] . |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[276-389] 6.8E-25 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[288-389] 5.8E-19 |
| SMART |
BTB/POZ_dom (IPR000210) - T[294-391] 8.8E-20 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[294-361] 16.921 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC1_HUMAN | 30.749 % | 143 | 1.27E-36 |
| RCBT2_HUMAN | 52.075 % | 510 | 1.22E-178 |
| RCBT1_HUMAN | 53.416 % | 533 | 0 |