- Transcript 'Boleac.CG.SB_v3.S338...' >
- Transcript 'KH2012:KH.C1.1193.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1415.g14733.02.t
Possible name(s)
HERC1; RCBTB1; RCBTB2
Gene model
Location
S1415 [10,008 / 14,762]
Amino acid sequence
Length: 433
>Phmamm.CG.MTP2014.S1415.g14733.02.p
GCLGVGDNINSLEPRCVESFNGKKIVGMSSGCGPHVLVLTEDGDVFTWGHNSYMQLGNGG
TAPGLIPSPLSRHFCKKAIQVACGSHHSMVLTVDGEVWAWGYNNCGQVGSGSTSNQGAPR
KVTACIGNKKIINIGCGQTASIAVTDGGEVYSWGYNGNGQLGVGNNVNQTNPCRIAALQG
VVIQQVICGYAHTLALTDDGVVFGWGANSYGQLGSGNKANTVTPLQVASNMGRVVTIAAS
HYSHCSAAQNQNGQVWMWGQLRQQPTAEPKLTSFTNLNAVFAHFSGPPISWRPMVVCSEA
EPSVHQSVSAAFNDEATSDLKIVSEGKVIYVHKALLKIRCDYFRRMFQSHWGENNQDTVE
INGYSYSVVYSFLQWLYTDHVELPPEDAIGLLDLATSYCENGLKFQCQRLIKEGINEENA
ALLYAAAIKYQAQ
Nucleotide sequence
Length: 1,301
>Phmamm.CG.MTP2014.S1415.g14733.02.t
GTGGATGTTTGGGTGTCGGGGACAATATCAATTCTTTGGAACCCAGATGTGTTGAAAGTT
TTAATGGAAAAAAGATTGTTGGAATGTCGTCAGGTTGTGGACCACATGTTCTTGTGCTAA
CAGAAGATGGGGATGTTTTTACTTGGGGTCACAACAGTTACATGCAACTGGGCAATGGCG
GGACTGCCCCAGGTTTAATTCCATCTCCTTTGTCTCGGCACTTTTGCAAGAAAGCAATTC
AGGTTGCTTGTGGTAGCCACCACTCAATGGTACTCACTGTTGATGGGGAGGTTTGGGCAT
GGGGTTACAACAACTGTGGACAGGTTGGTTCAGGTTCTACATCAAACCAAGGGGCACCAA
GAAAAGTTACAGCTTGCATTGGAAACAAGAAAATTATTAACATTGGCTGTGGACAGACTG
CCTCAATAGCAGTGACAGATGGAGGAGAGGTTTATTCATGGGGTTATAATGGTAATGGAC
AGTTGGGTGTAGGAAACAATGTTAATCAAACAAACCCATGTCGAATTGCTGCACTACAGG
GTGTTGTTATACAGCAGGTGATATGCGGTTATGCCCACACTTTGGCGTTAACCGATGATG
GTGTGGTGTTTGGTTGGGGAGCCAATAGTTATGGACAACTAGGATCTGGAAACAAAGCCA
ACACTGTTACACCATTGCAAGTTGCATCTAACATGGGACGGGTGGTAACGATCGCTGCTT
CGCATTATTCGCATTGTTCTGCTGCTCAAAACCAAAACGGACAGGTATGGATGTGGGGAC
AGTTACGTCAGCAGCCGACCGCAGAACCAAAATTGACGTCATTTACCAACCTCAACGCCG
TGTTCGCCCATTTTAGTGGACCTCCGATTAGTTGGCGACCAATGGTGGTTTGCAGTGAAG
CGGAGCCGTCTGTTCACCAGAGCGTGTCGGCTGCTTTCAATGACGAAGCGACATCTGACC
TCAAAATTGTCAGCGAGGGAAAAGTAATCTATGTTCACAAGGCTCTATTAAAAATAAGGT
GCGATTATTTTCGTCGAATGTTCCAGTCTCATTGGGGAGAAAATAACCAAGACACGGTGG
AAATTAACGGGTACAGTTACTCCGTAGTTTATTCCTTCTTGCAATGGCTTTATACCGATC
ACGTTGAACTGCCACCCGAAGATGCCATAGGTTTACTGGACCTGGCAACATCGTACTGTG
AAAATGGTTTAAAATTCCAATGTCAGCGTCTTATCAAAGAAGGAATTAACGAGGAAAATG
CGGCTTTACTTTACGCAGCTGCAATCAAATACCAAGCACAG
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[1-128] 1.1E-36 - T[130-278] 5.1E-38 |
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[1-260] 6.8E-72 |
| Pfam |
Reg_chr_condens (IPR000408) - T[42-91] 9.6E-12 - T[94-144] 1.5E-9 - T[148-196] 5.5E-14 - T[199-242] 2.2E-9 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[43-94] 14.986 - T[95-147] 13.519 - T[148-199] 17.459 - T[200-250] 11.509 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[44-60] 1.7E-13 - T[78-91] 1.7E-13 - T[97-113] 1.7E-13 - T[148-164] 1.7E-13 - T[186-202] 1.7E-13 - T[202-216] 1.7E-13 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[81-91] . |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[300-413] 9.42E-25 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[312-413] 5.3E-19 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[318-385] 16.921 |
| SMART |
BTB/POZ_dom (IPR000210) - T[318-415] 8.8E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC1_HUMAN | 35.6 % | 144 | 5.86E-37 |
| RCBT2_HUMAN | 55.069 % | 494 | 1.05E-172 |
| RCBT1_HUMAN | 57.044 % | 518 | 0 |