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TRANSCRIPT CARD

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  1. Clone 'cilv080a07' > 
  2. Transcript 'KH2012:KH.C1.144.v4....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S141.g04079.01.t

Possible name(s)

DOC2B; RPH3A

Gene model

Phmamm.CG.MTP2014.S141.g04079

Location

S141 [152,177 / 157,902]

Sequences

Amino acid sequence

Length: 297

>Phmamm.CG.MTP2014.S141.g04079.01.p
MQNFFLTKKILLQNLRSMDINGYSDPYVKMHIFPGIKKATKMRTKTKKKTLNPDFNETLT
YWGITTTDIERKRLRLMMQDEDTFGHNEFLGEVLVPLRLIEPYQTKTFELPLERHQAIKE
DEDNERGRMLIALCYEQRNSILVVTIQRCSGLLNPARGHNVDPQIKACLQVDDPGSNEMT
FRKTDRRKATRSPNPMFSEEMRLPLPGGVKELVKCRLDVTVWDRDALGRDHLIGGLMFGI
NSKGDKLHHWFHCVKNPSKQREMWHSLVLPDDPGRLAVLSATGKRRRSPKLSRKRLR

Nucleotide sequence

Length: 894

>Phmamm.CG.MTP2014.S141.g04079.01.t
ATGCAAAACTTTTTTTTGACCAAAAAAATACTTTTACAGAACCTTCGATCAATGGACATC
AACGGCTACTCCGACCCCTACGTAAAAATGCATATATTTCCTGGCATTAAAAAGGCGACC
AAGATGCGCACGAAAACCAAAAAGAAAACTTTGAATCCCGATTTCAACGAAACTCTTACC
TATTGGGGAATAACCACAACCGACATTGAGCGCAAGAGGTTAAGACTGATGATGCAAGAC
GAAGACACATTCGGACACAACGAATTTTTGGGTGAGGTTCTGGTACCTTTGCGCTTGATC
GAGCCTTACCAGACAAAAACCTTCGAATTGCCTCTGGAGCGCCACCAAGCGATCAAAGAA
GATGAGGACAACGAACGGGGCCGCATGCTGATAGCACTTTGTTACGAACAAAGAAACTCC
ATTCTCGTGGTCACAATACAGCGTTGTTCCGGGCTGCTCAACCCAGCAAGAGGCCACAAC
GTCGATCCGCAAATCAAAGCATGTTTGCAAGTGGATGACCCAGGGAGCAACGAAATGACT
TTTCGTAAAACCGATCGTCGAAAAGCGACACGAAGTCCAAACCCGATGTTTAGTGAGGAG
ATGCGACTTCCGCTGCCAGGTGGCGTTAAAGAGCTAGTAAAATGCCGACTTGACGTCACA
GTTTGGGATCGTGATGCGCTAGGACGAGATCACTTAATCGGTGGTCTAATGTTCGGTATC
AACAGCAAAGGCGACAAACTTCACCACTGGTTCCACTGCGTCAAAAACCCGAGCAAACAA
CGGGAAATGTGGCATAGTCTTGTTCTGCCTGACGACCCGGGGAGACTCGCTGTCCTATCG
GCAACTGGTAAACGGCGCAGATCACCGAAACTTTCCAGAAAGCGTCTGCGGTGA

InterProScan

ProSiteProfiles
C2_dom (IPR000008) - T[1-94] 16.717 - T[142-237] 9.761
SMART
C2_dom (IPR000008) - T[9-109] 3.2E-8 - T[141-252] 2.0E-4
Gene3D
C2_domain_sf (IPR035892) - T[9-113] 5.3E-28 - T[114-269] 3.3E-28
Pfam
C2_dom (IPR000008) - T[13-107] 8.0E-17 - T[141-252] 3.1E-10
PANTHER
Doc2b (IPR030534) - T[15-267] 1.4E-72
PRINTS
C2_dom (IPR000008) - T[20-32] 2.2E-5 - T[49-62] 2.2E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DOC2B_HUMAN 45.387 % 215 2.98E-67
RP3A_HUMAN 39.427 % 186 4.04E-54
DOC2A_HUMAN 38.095 % 180 4.59E-54