- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1453.g14830.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S1453 [3,743 / 5,171]
Amino acid sequence
Length: 378
>Phmamm.CG.MTP2014.S1453.g14830.01.p
MSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
TKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,137
>Phmamm.CG.MTP2014.S1453.g14830.01.t
ATGTCGGACTCAGAAGAAGATCAAACCGCACTTGTCTGCGACAACGGATCAGGATTGGTC
AAATCCGGATTCGCTGGTGATGACGCACCAAGAGCTGTTTTCCCATCCATTGTTGGACGA
CCAAGACATCAGGGTGTTATGGTCGGTATGGGACAAAAAGACAGCTATGTCGGTGACGAA
GCACAAAGCAAACGTGGTATCCTCACTCTTAAATATCCCATCGAGCACGGAATCATCACC
AACTGGGATGATATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGTGTCGCA
CCCGAGGAACATCCAACCCTCCTCACCGAAGCCCCACTTAACCCAAAGGCCAACCGTGAA
AAGATGACTCAAATTATGTTTGAAACCTTTAATGTGCCAGCAATGTATGTGGCCATTCAA
GCCGTGCTTTCCCTGTACGCATCTGGAAGAACCACAGGTATTGTTCTTGATGCCGGTGAC
GGTGTTTCACACAACGTCCCAATCTACGAGGGATATGCGCTCCCACACGCCATCGCGCGT
TTGGATTTGGCCGGACGTGATCTAACAGATTACTTGATGAAGATCTTGACTGAGAGAGGA
TATTCTTTCGTCACAACAGCTGAACGTGAAATCGTTCGTGATATCAAGGAGAAACTTTGC
TACGTCGCTCTTGACTTCGAACAAGAAATGGCAACCGCAGCTTCATCAACCTCTCTTGAG
AAGAGCTACGAACTTCCCGATGGTCAAGTTATCACTATTGGTAACGAGAGATTCCGTTGC
CCAGAAACACTTTTCCAGCCATCATTTATTGGTATGGAATCTGCTGGTATTCACGAGACA
ACATACAACTCCATCATGAAGTGTGACATCGACATCCGAAAGGATCTTTACGCCAACAAC
GTCCTCTCGGGAGGAACCACCATGTATCCTGGTATCGCCGACAGGATGCAGAAAGAGATC
ACTGCTCTTGCTCCAAGCACCATGAAGATCAAGATTATCGCTCCACCAGAGAGGAAATAC
TCTGTTTGGATCGGAGGATCAATCCTTGCATCTTTGTCCACCTTCCAGCAAATGTGGATC
ACCAAACAAGAATATGATGAAGCCGGCCCATCGATTGTTCACCGAAAATGCTTTTAA
| PANTHER |
Actin (IPR004000) - T[5-377] 8.9E-267 |
| Pfam |
Actin (IPR004000) - T[7-378] 2.7E-147 |
| SMART |
Actin (IPR004000) - T[8-378] 1.4E-232 |
| PRINTS |
Actin (IPR004000) - T[29-38] 1.8E-57 - T[52-63] 1.8E-57 - T[64-86] 1.8E-57 - T[118-131] 1.8E-57 - T[143-162] 1.8E-57 - T[239-255] 1.8E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.326 % | 767 | 0 |
| ACTS_HUMAN | 97.326 % | 767 | 0 |
| ACTC_HUMAN | 97.09 % | 767 | 0 |