Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1453.g14831.01.t

Possible name(s)

ACTA1; ACTA2; ACTC1

Gene model

Phmamm.CG.MTP2014.S1453.g14831

Location

S1453 [8,022 / 8,523]

Sequences

Amino acid sequence

Length: 166

>Phmamm.CG.MTP2014.S1453.g14831.01.p
MVTITSHKQLASAQGNLSIQQIVKKLKWFTDLDLLRFRKSNFKKKRCQIPKKIKPHLSAT
TDQDWSNPDSLVXMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
IAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF

Nucleotide sequence

Length: 501

>Phmamm.CG.MTP2014.S1453.g14831.01.t
ATGGTTACAATCACATCTCACAAGCAACTAGCATCAGCACAAGGTAATCTTTCTATTCAG
CAGATAGTAAAGAAGTTAAAGTGGTTCACAGACTTAGATTTGCTTAGATTTAGAAAATCT
AATTTTAAAAAGAAAAGATGTCAGATTCCGAAGAAGATCAAACCGCACTTGTCTGCGACA
ACGGATCAGGATTGGTCAAATCCGGATTCGCTGGTGATNATGAAGTGTGACATCGACATC
CGAAAGGATCTTTACGCCAACAACGTCCTCTCGGGAGGAACCACCATGTATCCTGGTATC
GCCGACAGGATGCAGAAAGAGATCACTGCTCTTGCTCCAAGCACCATGAAGATCAAGATT
ATCGCTCCACCAGAGAGGAAATACTCTGTTTGGATCGGAGGATCAATCCTTGCATCTTTG
TCCACCTTCCAACAAATGTGGATCACCAAACAAGAATATGACGAAGCCGGGCCATCCATT
GTTCACCGAAAGTGCTTTTAA

InterProScan

SMART
Actin (IPR004000) - T[1-166] 2.4E-4
PANTHER
Actin (IPR004000) - T[73-165] 2.1E-62
Pfam
Actin (IPR004000) - T[74-166] 1.1E-41
ProSitePatterns
Actin_CS (IPR004001) - T[147-155] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 98.925 % 198 3.64E-63
ACTS_HUMAN 98.925 % 199 2.03E-63
ACTC_HUMAN 98.925 % 198 2.9E-63