- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.L154.34.v2...' >
- Transcript 'Haaura.CG.MTP2014.S4...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1453.g14833.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S1453 [12,933 / 14,584]
Amino acid sequence
Length: 407
>Phmamm.CG.MTP2014.S1453.g14833.01.p
MSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXR
AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHH
TFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT
TGIVLDAGDGVSHNVPIYEGYALPHAIARLDLAGRDLTDYLMKILTERGYSFVTTAEREI
VRDIKEKLCYVALDFEQEMATAASSTSLEKSYELPDGQVITIGNERFRCPETLFQPSFIG
MESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIK
IIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,224
>Phmamm.CG.MTP2014.S1453.g14833.01.t
ATGTCAGATTCCGAAGAAGATCAAACCGCACTTGTCTGCGACAACGGATCGGGATTGGTC
AAATCCGGTTTCGCTGGTGATGACGCACCAAGAGCTGTTTTCCCATCCATTGTTGGACGA
CCAAGACATCAGGGTGTGATGGTCGGTATGGGTCAAAAAGACAGCTATGTCGGTNCAAGA
GCTGTTTTCCCATCCATTGTTGGACGACCAAGACATCAGGGTGTGATGGTCGGTATGGGT
CAAAAAGACAGCTATGTCGGTGACGAAGCACAAAGCAAACGTGGTATCCTCACTCTTAAA
TATCCCATCGAGCACGGAATCATCACCAACTGGGATGATATGGAGAAGATCTGGCATCAC
ACCTTCTACAACGAGCTCCGTGTCGCACCCGAGGAACATCCAACCCTCCTCACCGAAGCC
CCACTTAACCCAAAGGCCAACCGTGAAAAGATGACTCAAATCATGTTTGAAACCTTCAAT
GTGCCAGCAATGTATGTTGCCATTCAAGCCGTGCTTTCCCTGTACGCATCTGGACGAACT
ACAGGTATTGTTCTTGATGCCGGTGACGGTGTTTCACACAACGTCCCAATCTACGAGGGA
TATGCGCTCCCACACGCCATTGCGCGTTTGGATTTGGCCGGACGTGATCTCACAGATTAC
TTGATGAAGATTTTGACAGAGAGAGGATATTCTTTCGTCACAACCGCTGAACGTGAAATC
GTTCGGGACATCAAGGAAAAACTTTGCTACGTCGCTCTTGACTTCGAACAAGAGATGGCA
ACCGCTGCTTCATCAACCTCTCTTGAGAAGAGCTATGAGCTTCCCGATGGTCAAGTTATC
ACCATTGGTAACGAGAGATTCCGTTGCCCAGAAACACTTTTCCAGCCATCATTTATCGGT
ATGGAATCTGCTGGTATCCACGAGACAACATACAACTCCATCATGAAGTGTGACATCGAC
ATCCGTAAAGATCTTTACGCCAACAACGTCCTCTCTGGAGGAACCACCATGTATCCTGGT
ATCGCCGACAGGATGCAGAAAGAGATCACTGCTCTTGCTCCAAGCACCATGAAGATCAAG
ATCATCGCTCCACCAGAGAGGAAATACTCTGTTTGGATCGGAGGATCAATCCTTGCATCT
TTGTCCACCTTCCAGCAAATGTGGATCACGAAACAAGAATATGATGAAGCCGGCCCATCC
ATTGTTCACCGAAAATGCTTTTAA
| PANTHER |
Actin (IPR004000) - T[5-60] 9.6E-281 - T[59-406] 9.6E-281 |
| Pfam |
Actin (IPR004000) - T[7-407] 3.2E-146 |
| SMART |
Actin (IPR004000) - T[8-407] 8.3E-232 |
| PRINTS |
Actin (IPR004000) - T[58-67] 4.3E-55 - T[81-92] 4.3E-55 - T[93-115] 4.3E-55 - T[147-160] 4.3E-55 - T[172-191] 4.3E-55 - T[268-284] 4.3E-55 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[85-95] . - T[388-396] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[136-148] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 90.323 % | 751 | 0 |
| ACTS_HUMAN | 90.323 % | 752 | 0 |
| ACTC_HUMAN | 90.172 % | 752 | 0 |