- Transcript 'KH2012:KH.C1.1144.v1...' >
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- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1460.g14860.01.t
Possible name(s)
CPXM2; MFGE8; RS1
Gene model
Location
S1460 [20,505 / 22,268]
Amino acid sequence
Length: 180
>Phmamm.CG.MTP2014.S1460.g14860.01.p
MLKQVLVLLAIAALCSGCGCGCGSQCCDRGDGEKGDDKFSKINIQANRDVDDFHAPKWAR
LDQAFIPNVSVGSWSAATNNANQWIEVALGKATTITGVITQGRDSLDQWVTEFKVSYLAA
DLTWKTVNDNSGTAILFSGNSDRESPVTNMFYLPITAHKIRILPTKWHGHVSLRHEYLTC
Nucleotide sequence
Length: 543
>Phmamm.CG.MTP2014.S1460.g14860.01.t
ATGCTTAAACAAGTTTTAGTTTTGCTGGCAATCGCAGCATTGTGCAGCGGATGTGGTTGT
GGATGTGGAAGCCAATGTTGTGATCGAGGTGATGGCGAAAAAGGAGACGACAAGTTTAGC
AAGATCAATATCCAGGCCAATAGAGATGTGGACGATTTCCATGCTCCCAAGTGGGCAAGA
CTTGATCAAGCGTTTATTCCCAATGTTTCGGTTGGATCGTGGTCAGCGGCAACAAATAAT
GCTAATCAATGGATTGAAGTGGCCTTAGGGAAAGCTACAACGATTACTGGGGTCATAACC
CAGGGACGGGATAGTCTTGACCAGTGGGTGACAGAATTCAAGGTCTCGTATTTGGCTGCT
GATCTGACATGGAAAACTGTGAACGACAATTCAGGAACAGCAATACTCTTCAGTGGCAAC
AGCGACCGGGAAAGTCCAGTTACCAACATGTTCTATCTACCAATCACTGCCCACAAAATT
CGAATTCTTCCCACCAAGTGGCACGGTCATGTCTCACTGCGCCACGAATACTTGACTTGT
TAA
| ProSiteProfiles |
FA58C (IPR000421) - T[26-180] 29.583 |
| SMART |
FA58C (IPR000421) - T[26-180] 5.7E-12 |
| Gene3D |
Galactose-bd-like_sf (IPR008979) - T[35-180] 7.3E-41 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[44-180] 1.9E-34 |
| CDD |
FA58C (IPR000421) - T[52-176] 4.35938E-36 |
| Pfam |
FA58C (IPR000421) - T[56-176] 1.3E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MFGM_HUMAN | 36.719 % | 87.8 | 7.77E-21 |
| CPXM2_HUMAN | 40.278 % | 98.6 | 2.96E-24 |
| XLRS1_HUMAN | 35.78 % | 90.1 | 1.11E-22 |