Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1499.g14963.01.t

Possible name(s)

CEACAM5; PSG4; PSG6

Gene model

Phmamm.CG.MTP2014.S1499.g14963

Location

S1499 [9,265 / 13,327]

Sequences

Amino acid sequence

Length: 527

>Phmamm.CG.MTP2014.S1499.g14963.01.p
MLLYNVKENMDIYFVDTVGALVATTSIMLTDCEGYCNLSGCINSGGYNTSNNFSCVQNTS
LFVDGVMETTASLTCDVCSLWAGDAECWYGNHFSIIGVETSNNVVNTTDGVLVNANQDVT
VYCLTDSNPEALCHFYINNSLVRQPSCVFHQRIESSSFVSCTGQNKAGNQTSSNLTITVV
EQSTVIVFQYRSYIDAKYGIPEVKSSHDPSGTIKKGDDISLTCDVPYSTELQTTYFWDTP
ATQHDIDEPMLILNNLTRFDLGYYTCHTNDLFESTQATVFLNVTYGPEITAQNTTCKWSD
AENGDCFVDFASNPLTQKYTLTDNGSLVSCTNCHFQLQTSDSTVQRFVLIVEKSDKDTTL
ILNVFSTSPDFPEPLIANFYVTQHNVPQNSNQTVAIAASVSAIVVAFVIILVAIIVVRRK
RQPKQPECDGPTHNANVYVNEEFDQDGNSFSTDGYYDEGIPSKDVASPDGHFYDEEIRST
HSVNSPIYGYDNEPLYDDVPKHDAMSAYETTIIGKSDAPYEDCNRLK

Nucleotide sequence

Length: 1,584

>Phmamm.CG.MTP2014.S1499.g14963.01.t
ATGCTGCTCTACAATGTCAAAGAGAATATGGACATTTATTTTGTTGATACAGTTGGTGCA
TTAGTTGCTACAACAAGTATAATGCTAACAGATTGTGAAGGATACTGTAATCTTTCTGGT
TGTATTAATTCTGGAGGATACAACACTTCAAATAATTTCAGTTGTGTTCAAAATACTTCA
CTGTTTGTTGATGGAGTGATGGAAACAACAGCCTCATTGACATGTGATGTTTGTAGCTTA
TGGGCTGGTGATGCTGAATGTTGGTATGGGAATCATTTTAGCATAATTGGGGTTGAAACC
TCTAACAACGTTGTTAACACAACCGACGGTGTGTTGGTGAACGCCAATCAAGATGTTACG
GTGTACTGTTTGACTGATTCAAATCCTGAAGCATTGTGTCACTTTTACATCAACAACTCG
CTTGTCCGTCAGCCTTCCTGTGTTTTCCATCAAAGAATTGAAAGTTCATCTTTTGTGAGC
TGTACTGGTCAAAATAAGGCTGGAAACCAAACGAGTTCAAACCTAACAATTACAGTCGTG
GAACAAAGTACGGTAATAGTATTCCAGTACCGTAGTTACATTGACGCAAAGTACGGAATA
CCTGAGGTTAAGTCCAGTCATGACCCAAGTGGTACAATAAAGAAAGGAGATGATATATCA
TTGACCTGTGATGTTCCATACTCTACTGAACTGCAAACAACTTATTTTTGGGACACACCA
GCAACACAACATGACATTGATGAACCAATGCTAATTTTGAACAATTTGACCCGATTTGAT
TTGGGATACTACACTTGCCATACAAATGATTTGTTTGAATCTACTCAAGCTACAGTATTC
TTAAATGTCACTTATGGTCCAGAAATCACTGCTCAAAATACAACGTGCAAATGGAGTGAT
GCGGAAAATGGAGATTGCTTTGTTGATTTTGCTTCAAACCCACTTACGCAGAAGTACACA
TTGACTGATAATGGTAGTCTAGTGTCATGCACGAACTGTCATTTTCAACTACAAACCAGT
GATTCAACAGTTCAAAGATTTGTTCTAATTGTCGAGAAATCGGATAAAGATACTACTTTA
ATTCTTAATGTATTTTCAACTTCTCCTGACTTTCCTGAACCTTTGATTGCCAACTTTTAT
GTAACACAACACAATGTTCCTCAAAATTCTAATCAAACTGTGGCTATAGCTGCAAGCGTG
TCAGCAATTGTTGTGGCCTTTGTTATCATTCTTGTTGCTATAATTGTTGTAAGAAGAAAA
CGCCAGCCGAAACAGCCAGAATGCGATGGTCCAACTCATAATGCCAATGTTTACGTAAAC
GAGGAGTTTGACCAAGATGGAAACAGCTTTAGTACGGATGGATATTATGATGAAGGTATT
CCATCTAAAGATGTCGCTTCTCCCGATGGTCATTTCTATGATGAAGAAATAAGATCAACA
CATAGTGTTAATTCTCCGATCTACGGTTATGACAATGAACCTCTTTACGATGATGTGCCC
AAACACGATGCAATGAGTGCTTATGAAACCACTATCATTGGAAAATCAGACGCACCGTAT
GAGGATTGCAACCGTTTGAAATGA

InterProScan

SMART	Ig_sub (IPR003599) - T[108-180] 140.0 - T[208-284] 6.2E-6
Gene3D	Ig-like_fold (IPR013783) - T[195-295] 8.8E-10
ProSiteProfiles	Ig-like_dom (IPR007110) - T[201-284] 9.664
SUPERFAMILY	Ig-like_dom_sf (IPR036179) - T[210-287] 7.25E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value