- Clone 'cieg042m19' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Clone 'cien155162' >
- Clone 'ciad081b14' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S151.g04280.01.t
Possible name(s)
RPAP3; SGTB; STIP1
Gene model
Location
S151 [193,181 / 198,684]
Amino acid sequence
Length: 532
>Phmamm.CG.MTP2014.S151.g04280.01.p
MSEQLKNQGNQALRDGKVKEAIGYYSKAIEADSKNHVLYSNRSAAYAKDEDYLAALKDAE
TVIEIKQDWPKGYSRKGSALEFLNRYEEAKMCYEEGLKHDPNNEQFKSGITQCESHLTGP
AGSQPMNPFSDLKGITEKLRNNTKTKDFFKDPSYLRMLEDLHRDPKCISQKLGDPRFQTT
LSAILGFDFEMANGSRDEPMDTSPAPSNKPEKKAKPEKPKLSNNEEAALEEKALGNAAYK
MKDFEEALKHYQKACELDPKNMTFLTNIAAVYFEQNEMEKCREVCQKAVDVGRENRAEYA
QVAKAFGRIGNSYLKEKDYKNAIFYYNKSLSENRTKDTLTKLQQCEKAIADAERLAYINP
ELALEEKAKGNELYKKGKYPEALKCYSEAIKRDPDNAALYSNRAACYMKLLEFRIALKDC
DECVKKDPQFIKGHVRRGGVLEAMKEFSRATDAYQKALDIDPNNSEASDGMRRCLHGDYK
NRNNPEEVQKRAMNDPEVMRIMKDPAMKMILDQIQNDPRALQEHLKNPEVAR
Nucleotide sequence
Length: 1,641
>Phmamm.CG.MTP2014.S151.g04280.01.t
TGTGTCTACTAACTGGCTGTTTACACCAAGCGACATCCATTTGCAATGAGTGAGCAACTT
AAAAACCAGGGCAACCAAGCACTTAGGGATGGAAAAGTTAAAGAGGCCATTGGATATTAT
TCAAAGGCCATTGAAGCTGATTCAAAGAACCATGTCCTGTACAGTAACCGATCAGCAGCA
TATGCCAAAGATGAGGATTACCTGGCAGCCTTAAAAGATGCTGAAACGGTCATTGAAATC
AAACAAGATTGGCCCAAAGGTTATTCAAGAAAAGGCTCAGCCCTGGAGTTTTTAAACCGA
TATGAAGAAGCAAAAATGTGCTATGAGGAGGGTCTTAAACACGATCCAAATAATGAACAG
TTTAAAAGTGGAATTACCCAGTGTGAAAGTCACTTAACAGGTCCTGCAGGCAGCCAACCA
ATGAATCCATTTAGTGACCTTAAAGGAATAACAGAGAAACTGAGAAATAACACAAAGACA
AAAGACTTCTTTAAGGACCCAAGCTACTTGAGGATGTTGGAAGACCTGCATAGAGATCCC
AAATGTATTTCCCAAAAACTTGGAGATCCAAGATTTCAAACCACTCTCAGTGCCATATTG
GGATTTGACTTTGAAATGGCAAATGGAAGTCGTGATGAACCAATGGACACCAGCCCGGCT
CCATCAAACAAACCAGAGAAAAAAGCAAAACCAGAAAAGCCAAAACTAAGCAATAATGAA
GAAGCTGCCTTGGAGGAAAAAGCATTGGGTAATGCTGCATACAAAATGAAAGACTTTGAA
GAAGCATTAAAACATTACCAAAAGGCTTGTGAACTGGACCCCAAAAACATGACCTTCCTC
ACAAACATCGCAGCTGTATACTTTGAGCAAAATGAAATGGAGAAATGCCGGGAAGTATGT
CAGAAGGCTGTGGATGTAGGAAGGGAAAATCGTGCTGAATATGCACAAGTTGCAAAAGCA
TTCGGCCGCATTGGAAACTCTTATCTCAAAGAAAAGGATTACAAAAATGCAATTTTTTAC
TACAACAAATCCCTCAGTGAAAATCGAACTAAGGACACACTCACCAAGCTTCAGCAATGC
GAAAAAGCTATTGCAGATGCTGAAAGACTTGCCTACATTAATCCAGAACTTGCTCTAGAG
GAAAAGGCCAAAGGGAATGAACTGTACAAAAAAGGCAAATATCCAGAGGCCTTGAAATGT
TATTCTGAGGCGATTAAACGGGACCCAGACAATGCAGCGTTGTACTCAAACCGTGCTGCT
TGCTACATGAAACTTCTGGAGTTCCGAATCGCCCTGAAAGATTGTGATGAATGTGTGAAA
AAGGATCCACAGTTTATTAAAGGTCATGTTAGAAGAGGTGGTGTACTAGAAGCTATGAAG
GAATTTTCACGAGCAACTGATGCTTACCAGAAAGCTCTTGATATCGACCCAAACAACTCT
GAAGCATCTGATGGAATGAGGCGATGCCTACATGGTGATTACAAGAATCGAAACAATCCG
GAAGAAGTACAGAAGCGAGCGATGAATGATCCTGAAGTGATGAGGATTATGAAAGATCCT
GCCATGAAGATGATCCTAGATCAGATCCAAAATGACCCAAGAGCCTTGCAAGAGCATTTA
AAAAATCCCGAGGTTGCCCGC
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[1-116] 3.1E-39 - T[226-352] 3.3E-45 - T[353-479] 1.8E-46 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[2-114] 1.06E-37 - T[226-350] 2.39E-42 - T[362-475] 1.28E-40 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[2-35] 8.762 - T[36-69] 5.428 - T[70-103] 9.116 - T[228-261] 11.918 - T[262-295] 6.667 - T[303-336] 9.735 - T[363-396] 10.001 - T[397-430] 6.844 - T[431-464] 11.004 |
| SMART |
TPR_repeat (IPR019734) - T[2-35] 0.0037 - T[36-69] 22.0 - T[70-103] 1.1E-5 - T[228-261] 1.6E-6 - T[262-295] 1.7 - T[303-336] 6.4E-5 - T[363-396] 3.2E-5 - T[397-430] 0.0011 - T[431-464] 1.2E-4 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[2-103] 19.973 - T[228-464] 35.333 |
| Pfam |
TPR_1 (IPR001440) - T[71-103] 1.4E-6 - T[303-334] 7.9E-7 |
| Pfam |
TPR_repeat (IPR019734) - T[435-464] 0.14 |
| SMART |
STI1_HS-bd (IPR006636) - T[495-532] 0.0026 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STIP1_HUMAN | 54.887 % | 572 | 0 |
| RPAP3_HUMAN | 28.409 % | 94 | 3.3E-20 |
| SGTB_HUMAN | 31.361 % | 88.6 | 2.37E-19 |