Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1524.g15033.02.t

Possible name(s)

Phmamm.CG.MTP2014.S1524.g15033

Gene model

Phmamm.CG.MTP2014.S1524.g15033

Location

S1524 [25,125 / 28,978]

Sequences

Amino acid sequence

Length: 411

>Phmamm.CG.MTP2014.S1524.g15033.02.p
MVLFAGGLSLVQPRQIHSSNGFLQLNLSVQVGEFTVDWLTLSRRSYNGEFPGPTWRIKPG
DVVNLTLRPHDNVFVNVTPENGQYHYNYPIVSDHPAGTYWYHPHLHGSVDFQTNSGMSGM
IIVEDPTDSTTPQHLLDASCPGKCEHDVQLIFQSLLFYTGHGFASAQQSMHDRLFTMVNA
GARQVLELFVADEHNNSACDFYEIAVDGVYLDNPTRPRFGKSFVVPASRIDWLIVCNKPG
TYYLKSYAPDFEMISTAKISRYNGTLLTIVATGPETKTTIPTELPKRPEYNVEVDTVQEW
YLTNTGTVESHPIHIHVNSFQVISYNAYTGPFDSNSMKYWNQKMEPCFYQFGGYNESADV
QIPKDPLRYLGHEKRWKDGNGGPETIGLSQPGVFRDVILVPPLSNITVNKF

Nucleotide sequence

Length: 1,236

>Phmamm.CG.MTP2014.S1524.g15033.02.t
ATGGTCCTATTTGCAGGAGGACTTTCTTTAGTCCAGCCCCGACAGATTCATTCTTCAAAT
GGGTTTCTGCAACTGAATCTTTCGGTACAAGTCGGTGAGTTCACAGTGGATTGGCTAACA
CTTTCCAGACGAAGCTACAACGGGGAATTCCCAGGACCGACGTGGCGTATTAAACCAGGA
GATGTAGTGAACCTAACATTGCGCCCCCATGACAACGTCTTTGTGAACGTGACACCAGAA
AATGGACAGTATCATTACAACTATCCTATAGTTTCTGATCATCCAGCAGGAACCTATTGG
TACCATCCTCATCTACATGGATCAGTAGACTTTCAGACGAATAGTGGAATGTCGGGAATG
ATTATTGTTGAGGATCCAACTGACTCTACAACACCTCAGCACTTACTTGATGCATCGTGT
CCAGGCAAATGCGAACATGATGTGCAGCTGATATTTCAATCCTTGCTCTTTTATACTGGC
CATGGATTCGCATCTGCCCAACAATCGATGCACGACCGACTTTTCACGATGGTTAATGCA
GGAGCAAGACAAGTTTTAGAGTTGTTTGTGGCGGATGAGCATAACAACTCGGCTTGTGAT
TTCTATGAGATCGCTGTCGATGGAGTTTATCTGGACAATCCAACTCGTCCACGATTTGGA
AAAAGCTTCGTTGTTCCTGCTTCAAGAATAGACTGGTTGATTGTCTGCAACAAACCCGGG
ACCTACTATTTAAAGTCTTACGCCCCAGATTTCGAGATGATTTCCACAGCGAAGATTTCT
AGATATAACGGAACCCTTCTTACAATCGTAGCAACTGGGCCAGAAACAAAAACTACCATC
CCCACCGAGCTTCCTAAACGACCCGAGTATAATGTGGAAGTTGACACAGTCCAGGAATGG
TATCTTACCAACACAGGAACAGTTGAAAGCCACCCAATTCATATTCACGTCAACAGCTTT
CAAGTTATTAGTTACAACGCTTATACCGGTCCATTCGATAGCAACAGCATGAAGTACTGG
AATCAGAAGATGGAACCTTGCTTCTATCAATTTGGAGGCTACAACGAATCCGCCGACGTC
CAAATACCAAAAGATCCGCTCAGGTATCTCGGCCATGAAAAGCGCTGGAAGGATGGAAAC
GGTGGACCTGAAACCATTGGTCTCTCGCAGCCTGGAGTTTTCCGTGACGTCATCCTGGTG
CCACCGTTGTCCAACATCACAGTAAACAAGTTTTAG

InterProScan

Gene3D	Cupredoxin (IPR008972) - T[8-69] 2.8E-7 - T[70-150] 1.0E-14 - T[171-276] 9.5E-8
SUPERFAMILY	Cupredoxin (IPR008972) - T[14-128] 2.28E-17 - T[262-406] 3.61E-10
Pfam	Cu-oxidase_3 (IPR011707) - T[79-127] 1.7E-7
Pfam	Cu-oxidase_2 (IPR011706) - T[280-342] 9.7E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value