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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S9...'
  2. Transcript 'KH2012:KH.C11.459.v2...'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S152.g04296.02.t

Possible name(s)

LPP; TRIP6; ZYX

Location

S152 [152,076 / 157,010]

Sequences

Amino acid sequence

Length: 312

>Phmamm.CG.MTP2014.S152.g04296.02.p
VDKLTNQLIVGLSNGDSKKTNDQYQEYNLPPPPDLDDFLVAQPPPPKPVVNGSAKYPVVK
HSEDFPKPPTPTYIQEQPAPPPVVMSKPAPPPVLPKPSRSAPLKATHTGVNSVSFQINKP
SSKPPSTERPAVGPGSESKEAKKKAEDELDYITKTLLDNLDNPSDKDMYGFCAKCNKIVE
GEKVGCTAMDQVYHIECFTCTSCSNPLHGEQFFAIGNKPWCQPCYVQSLDKCAVCQAPIT
ERILRATGKAYHPACFTCMACGKSLDGIPFTVDDNKDIYCVEDYHKKYAPRCSVCDDLIM
PEPGKEETVRIV

Nucleotide sequence

Length: 939

>Phmamm.CG.MTP2014.S152.g04296.02.t
AGTAGATAAACTGACCAATCAGCTAATCGTTGGCCTTAGCAACGGCGACAGTAAAAAGAC
CAACGACCAATACCAGGAGTACAATCTCCCGCCACCACCAGATCTGGACGACTTTCTAGT
TGCACAGCCACCTCCGCCAAAACCTGTGGTAAACGGTTCAGCTAAGTATCCTGTTGTAAA
GCACAGCGAAGACTTTCCAAAACCGCCAACTCCAACATATATACAGGAACAACCTGCACC
CCCACCAGTCGTGATGTCGAAACCAGCACCCCCTCCTGTCCTTCCAAAACCTTCCAGGTC
TGCCCCACTCAAGGCAACCCATACTGGAGTCAACTCCGTATCATTTCAAATTAACAAGCC
TTCATCAAAGCCGCCTTCCACTGAACGTCCAGCGGTTGGACCCGGCTCCGAGTCAAAGGA
AGCAAAGAAAAAAGCTGAAGATGAACTCGATTATATTACCAAGACCCTGCTCGACAACTT
GGATAACCCATCGGACAAAGACATGTATGGATTCTGCGCCAAATGCAATAAGATCGTAGA
AGGGGAGAAGGTCGGGTGTACAGCGATGGACCAAGTTTACCACATTGAGTGTTTCACCTG
CACCAGCTGCAGTAATCCTTTGCATGGAGAGCAATTCTTTGCGATTGGCAATAAGCCATG
GTGTCAGCCATGTTACGTTCAGTCACTGGATAAATGTGCTGTATGTCAAGCCCCTATCAC
TGAAAGGATTCTCCGTGCAACAGGTAAAGCTTACCACCCCGCCTGCTTTACATGTATGGC
TTGTGGCAAAAGCTTGGATGGGATTCCATTCACTGTTGATGACAACAAAGACATATATTG
TGTGGAAGATTATCACAAGAAATACGCCCCACGTTGTTCAGTGTGCGATGATTTGATTAT
GCCCGAACCTGGCAAGGAAGAAACAGTTCGAATTGTGGC

InterProScan

ProSiteProfiles
Znf_LIM (IPR001781) - T[170-229] 10.791 - T[230-290] 13.939
SMART
Znf_LIM (IPR001781) - T[171-224] 8.5E-17 - T[231-283] 3.7E-18
Pfam
Znf_LIM (IPR001781) - T[172-227] 1.0E-13 - T[232-287] 3.2E-14
ProSitePatterns
Znf_LIM (IPR001781) - T[232-265] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRIP6_HUMAN 53.293 % 216 6.16E-67
LPP_HUMAN 57.303 % 235 7.56E-73
ZYX_HUMAN 45.614 % 174 6.64E-50